Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0446 ATGAAATGGGCAGAGCTTATTGATGAAAACGTAGAAGAGTTAGCAGCATTAGAAGCTCTTGATGCTGGAAAGTTGTACAATTGGTGTAAAACTGTTGATATTCCCTTAGTAGCCAATACTATCCGATACTATGCTGGTGCTGCTGATAAAATTCATGGAGAGGTATTAAAAGCATCTATGGAGTTCCATGCATATACATTGATGGAACCAATTGGTGTAGTTGGCCACATTATTCCCTGGAATTTCCCAAGCACCATGTTTGCCGCAAAATCGGCTCCTTCCCTAGCCGCCGGTTGCACCATGGTCCTCAAGCCTGCTGATCAAACACCTCTTACAGCTTTGTTTTATGCTCATCTAGCTAAGCAGGCTGGAATTCCCGATGGAGTGCTCAATGTAGTACCTGGATTTGGTGCAACTGCAGGATCTGCAATAAGTTCACACATGGACGTAGATAAGGTTGATTTCTTAGTACCATTATATCGACTATCAAATAATGCTTCTAAAATTGAGTTGATGGTTAGCTTTACTGGTTCAACAGATGTCGGCCGTGAAGTGATGGTGGCAGCCGCTAGGAGTAATTTGAAACCAGTTTCACTTGAATTAGGAGGCAAGTCACCCATTTTAATTTTTGATGATGCTGATATAGATAAAGCTGCTGAGCTTGCTCTTTTTGGCTTCCTATTCAACAAGGGAGAAATTTGTGTTGCGGGTACCCGTGTGTTCGTTCAGGAAGGAATCTATGATGAATTTGAGAAGAAATTGGTGGAGAAGGCAAAAGCTTGGGTTGTTGGAGATCCTTTTGATCCAAAATCTCAGCATGGTCCTCAAGCTAACAAGAAGCAATTTGAAAAAATTCTTTCATATATTGAGCATGGGAAGAGAGAAGGAGCTACCCTTTTGACAGGGGGTAAAAGAGTGGGAGACAAGGGCTATTACATTGAACCTACAATTTTCTCTAATGTTAAGGAGGACATGCTCATAGCTAAGGATGAAATATTTGGCCCAGTGCTTTCACTGATGAAGTTTAAGACCATTGAGGAAGGAATAAAAAATGCTAACAATACAAAATATGGGCTAGCAGCTGGAATAGTAACCAAGGACATAGATATAGCAAACACTGTATCAAGGTCGATTCGTGCTGGTATTGTATGGATAAACTGTTACTTTGCCTTTATGGATGATGTTCCTTATGGAGGGTATAAAATGAGTGGATTTGGAAGAGATTGTGGTTTGGATGCCCTACATAAGTACCTACAAGTTAAATCTGTTGTAACCCCACTTTACAATTCTCCTTGGCTTTGA 1302 0.4071 MKWAELIDENVEELAALEALDAGKLYNWCKTVDIPLVANTIRYYAGAADKIHGEVLKASMEFHAYTLMEPIGVVGHIIPWNFPSTMFAAKSAPSLAAGCTMVLKPADQTPLTALFYAHLAKQAGIPDGVLNVVPGFGATAGSAISSHMDVDKVDFLVPLYRLSNNASKIELMVSFTGSTDVGREVMVAAARSNLKPVSLELGGKSPILIFDDADIDKAAELALFGFLFNKGEICVAGTRVFVQEGIYDEFEKKLVEKAKAWVVGDPFDPKSQHGPQANKKQFEKILSYIEHGKREGATLLTGGKRVGDKGYYIEPTIFSNVKEDMLIAKDEIFGPVLSLMKFKTIEEGIKNANNTKYGLAAGIVTKDIDIANTVSRSIRAGIVWINCYFAFMDDVPYGGYKMSGFGRDCGLDALHKYLQVKSVVTPLYNSPWL 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0446 433 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 227 238 IPR016160 GO:0016491
Lal25g0446 433 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 2 423 IPR016162 GO:0016491
Lal25g0446 433 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 205 394 IPR016163 GO:0016620
Lal25g0446 433 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 199 206 IPR029510 GO:0016491
Lal25g0446 433 PANTHER NAD-DEPENDENT ALDEHYDE DEHYDROGENASE FAMILY PROTEIN 172 433 - -
Lal25g0446 433 PANTHER NAD-DEPENDENT ALDEHYDE DEHYDROGENASE FAMILY PROTEIN 1 155 - -
Lal25g0446 433 SUPERFAMILY ALDH-like 2 429 IPR016161 GO:0016491
Lal25g0446 433 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 1 155 - -
Lal25g0446 433 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 172 433 - -
Lal25g0446 433 Pfam Aldehyde dehydrogenase family 2 155 IPR015590 GO:0016491
Lal25g0446 433 Pfam Aldehyde dehydrogenase family 172 423 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0446 Lal-Chr25 3065434 3070381 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0446 2 433 Aldehyde Dehydrogenase Gene Family AT3G24503 69.515 0.0 619
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0446 K12355 - gmx:100783920 717.613