Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0444 ATGGATGATATGGAAGATGATGCAAGGTATCCTCCAAATTCGTTTTCTCTGAACCGTCAAAACCATTCTCATCGCCAGAAAAACCAAATTCAAGGCACACCTTATCATCACCATCGTCCAATTCCCACTCGCTACGTAGAAGAATCCGATGAAGACGAAGAACCCGATAAATTTGACAATTACGACGCTGAAGAAGATGAATTCGAAGAAGGGCAAAATGGGTATGGTGTTAATTTTGAAAATGATGATGGGTTCGGCAAGAACCCTAGCAAGAAGAGGAAAGTACGAGACGGTCACTACGAGCTTGCGCCACGATTGAAAATGTCGTATAATCGAAGTTCTGCGAATGATTGGACAGAACATGCTACTTTTGTACTGTTGGAGGTTTGGGGGGACAAGTTCCTTCAACTTGGGAGGAATAGTTTGAGGTTAGAAGATTGGAACGATGTGGCGGAGAAGGTTTCGGAGGAATTGAAGGTGGAAAGGAATGTTTTTCAATGTAGGAACATGTTAGATAAGCTGAAAAGTAGGTATAAGAAAGAAAAAGCTAGAATTGATGAAATGTGTTTGAGTATTAGTAAATGGGCTTATTTCAAGAAAATGGATATGTTGATGGCTTCTTCCTCAAGGCAAGAGTATGGTTTAGCTTGTGGTGTTGATTCTGGTGAATATGTGTTTATGAATACAAGGGTGTATTTGAATAAGTCTAATGGATTTGATGAAATGAGGGATAGTCCCGGTGAGAGTGAGACTGATGAGGATAATGATGATTCAAAGACGGGGATTCGCGGTAGCGATGACGAGGATAAGATTTCGTATAGGGTTCTGTCTGATTCCATTCAGAAGTTTGGGAGGATATATGAGAAGATTGAGAATAGTAAGAGGAAACAGATGATGGAATTGGAGAAGATGAGGTTGGATTTTAATAGGGAGTTGGAGGTCCAGAACAAGCAGATTTTGGAAAGGGCTCAGGCTGAGATAGCTAAAATAAAGGAAGTGCATGAGGAATTGCAATCTTGGGAACTGGAAAATGTAATTTTCTACAAGCTGAAATGTGCTGCTGCAAGTAAAGTGCTTAACAAGCCCTTTATGTATTCTGACAATGTAGAAGTTGCTTCAAAAGCGTAA 1128 0.4025 MDDMEDDARYPPNSFSLNRQNHSHRQKNQIQGTPYHHHRPIPTRYVEESDEDEEPDKFDNYDAEEDEFEEGQNGYGVNFENDDGFGKNPSKKRKVRDGHYELAPRLKMSYNRSSANDWTEHATFVLLEVWGDKFLQLGRNSLRLEDWNDVAEKVSEELKVERNVFQCRNMLDKLKSRYKKEKARIDEMCLSISKWAYFKKMDMLMASSSRQEYGLACGVDSGEYVFMNTRVYLNKSNGFDEMRDSPGESETDEDNDDSKTGIRGSDDEDKISYRVLSDSIQKFGRIYEKIENSKRKQMMELEKMRLDFNRELEVQNKQILERAQAEIAKIKEVHEELQSWELENVIFYKLKCAAASKVLNKPFMYSDNVEVASKA 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0444 375 Pfam Myb/SANT-like DNA-binding domain 116 203 IPR044822 -
Lal25g0444 375 MobiDBLite consensus disorder prediction 47 71 - -
Lal25g0444 375 Coils Coil 287 343 - -
Lal25g0444 375 MobiDBLite consensus disorder prediction 1 95 - -
Lal25g0444 375 MobiDBLite consensus disorder prediction 237 266 - -
Lal25g0444 375 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 38 335 IPR044823 -
Lal25g0444 375 MobiDBLite consensus disorder prediction 13 30 - -
Lal25g0444 375 PANTHER ALCOHOL DEHYDROGENASE TRANSCRIPTION FACTOR MYB/SANT-LIKE FAMILY PROTEIN 38 335 - -
Lal25g0444 375 Gene3D - 118 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0444 Lal-Chr25 3060299 3061957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0444 118 336 Trihelix Transcription Factor Family AT1G54060 29.811 1.90e-17 81.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lal25g0444 Myb_DNA-bind_4 7.3e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0444 - - ccaj:109813475 452.981