Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0441 ATGAAGAAAATAACATTTTCATCTATTCTCTTACTCTTCCTTATTCCCTTATTGTTTCTAACCACATTCTCATTCTCATTCTCACACTCTCAATCTTTCATAAACCATGCTTCTCTCACTCATTCACAACTCGCTGACTCAGAACTCACTTTCAAACACGAGTTCGGAGATAGAGGAGAGAATATTACAATAGACTCAACCCTAGTTTTTGAAAACAACCGCATCAGGAATGCTTACGTGGCACTCCAAGCGTGGAAGCAAGCTATTTTCTCTGATCCTAATAATATAACGCTAGATTGGGTGGGATCTGATGTGTGCAACTATACCGGAGTGTTCTGTGCAACCGCACTTGATAACCGTAAGATTAGGACTGTTGCCGGCATTGACCTCAACCACGGTGATATTGCCGGTTATTTACCGGAGGAGCTAGGGCTTCTCTCCGATCTTGCGCTTTTTCATATCAATAGTAACCGTTTCTGTGGTACGGTTCCGAGAAAGTTCGAGAAGCTGAAGATTCTGTTTGAGTTGGATCTGAGTAATAATCGATTTGCGGGGAAGTTCCCGGTGGTGGTTTTAGGGTTACCGAAGCTGAAGTTTCTAGATCTGAGGTTTAATGAATTTGAAGGAACGGTGCCGAAGGAGTTGTTTGATAAGGATCTGGACGCCATTTTTGTTAATGATAATCGATTTGTGTTCGATATTCCTGAGAATTTTGGGAATTCGCCGGTGTCGGTGATTGTTCTGGCAAATAACCGTTTTCATGGTTGTGTTCCGGCGAGTCTTGGTAACATGTCGAATCTGAATGAGATTCTTTTGTTGAACAATGCGCTACGTTCGTGTTTTCCTCCGGAGGTTGGGCTTTTGAAGAATCTTACGGTCTTCGATGTTAGCTTCAACCAGCTTTTGGGACCGTTGCCAGAGGCTGTCGGAGGAGCGGTGAGTTTGGAGCAGCTTAATGTGGCGCATAATTTGCTGTCTGGAAAGATTCCGGCGAGTATTTGTAATCTTCCGAATCTGCAGAATTTTACTTATTCTTATAACTTCTTCTATGGAGAGCCACCAAAGTGTTTGGCGTTGCCGGCGGTTGATGATCGGAAGAATTGTATTCCGGCTAGACCGGCGCAACGGACTGAGAAGCAATGTAAGTTGTTTTTGTCAAAACCTGTGGATTGTAACTCTTTTAGGTGTAAGCCTTTTGTTCCTTCCTTGTCCCCACCACCGGTTGCGCTTCCTCCACCAGTGTATTCACCACCACCAGTCTATTCGCCGCCACCTCCGTCGCCACCCCCACCAGTCTATCCCCCGCCACCTCCTCCACCGCAGTATTCGCCGCCGCCGCCACCTCCACCTCCACACGTATATTCACCTCCACCACCTTCACCATCACCTCCACCACCTTCGCCGCCACCACCATCACCCCCACCACCTTCGCCTCCGCCTCCATCACCCCCGCCACCCTCACCCCCGCCCCCATCACCCCCACCACCCTCACCCCCGCCACCTCCGCCTCCATTGAGTTCACCACCTCCACCTTCACCATCGCCGCCTCCACCCTCTCCCCCACCACCTTCACCGCCACCACCATCGCCAGTATATTGTGTCCGTCCACCACCACCGCCAACACCATCAAATTCACCACCACCACCTGCTCCTGTATTCTCCCCACCACCACCTGTACCTTACCCCTATTACTCACCACCTCCATCACCATCACCTCCACCGCCATCGCACTCACCTCCTCCACCACCATTTCACTCGCCTCCACCACCACCTCACTCGCCTCCACCACCACCACCACCCCACTCACCTCCACCACCAGTTTACCCCTATTTGTCTCCACCACCACCACTCCACTCCCCTCCACCACCACCACCCCACTCACCTCCACCACCAGTTTACCCCTATTTGTCTCCACCACCTCCACCCCCAGTTCATTCTCCCCCACCACCACCTTGTATAGAACCACCTCCACCTCCACCTCCAACATCTTGTGAAGAGAATCCACCACCACCAGTCTATTATAGCTACCCATCACCACCACCAGTTCACTACAGTTGGCCGCCTCCACCACCACCACAATCTCCACCACCCGCCCCAGTATATGAAGGGCCATTACCACCTGTTATTGGAGTGTCATATGCATCACCTCCTCCACCACCCTTTTATTGA 2169 0.5076 MKKITFSSILLLFLIPLLFLTTFSFSFSHSQSFINHASLTHSQLADSELTFKHEFGDRGENITIDSTLVFENNRIRNAYVALQAWKQAIFSDPNNITLDWVGSDVCNYTGVFCATALDNRKIRTVAGIDLNHGDIAGYLPEELGLLSDLALFHINSNRFCGTVPRKFEKLKILFELDLSNNRFAGKFPVVVLGLPKLKFLDLRFNEFEGTVPKELFDKDLDAIFVNDNRFVFDIPENFGNSPVSVIVLANNRFHGCVPASLGNMSNLNEILLLNNALRSCFPPEVGLLKNLTVFDVSFNQLLGPLPEAVGGAVSLEQLNVAHNLLSGKIPASICNLPNLQNFTYSYNFFYGEPPKCLALPAVDDRKNCIPARPAQRTEKQCKLFLSKPVDCNSFRCKPFVPSLSPPPVALPPPVYSPPPVYSPPPPSPPPPVYPPPPPPPQYSPPPPPPPPHVYSPPPPSPSPPPPSPPPPSPPPPSPPPPSPPPPSPPPPSPPPPSPPPPPPPLSSPPPPSPSPPPPSPPPPSPPPPSPVYCVRPPPPPTPSNSPPPPAPVFSPPPPVPYPYYSPPPSPSPPPPSHSPPPPPFHSPPPPPHSPPPPPPPHSPPPPVYPYLSPPPPLHSPPPPPPHSPPPPVYPYLSPPPPPPVHSPPPPPCIEPPPPPPPTSCEENPPPPVYYSYPSPPPVHYSWPPPPPPQSPPPAPVYEGPLPPVIGVSYASPPPPPFY 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0441 722 Gene3D Ribonuclease Inhibitor 77 368 IPR032675 -
Lal25g0441 722 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 9 497 - -
Lal25g0441 722 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 4 9 497 - -
Lal25g0441 722 PRINTS Proline rich extensin signature 401 422 - -
Lal25g0441 722 PRINTS Proline rich extensin signature 424 440 - -
Lal25g0441 722 PRINTS Proline rich extensin signature 454 479 - -
Lal25g0441 722 Pfam Leucine rich repeat 149 206 IPR001611 GO:0005515
Lal25g0441 722 MobiDBLite consensus disorder prediction 608 627 - -
Lal25g0441 722 MobiDBLite consensus disorder prediction 566 603 - -
Lal25g0441 722 MobiDBLite consensus disorder prediction 438 552 - -
Lal25g0441 722 Pfam Leucine rich repeat N-terminal domain 81 113 IPR013210 -
Lal25g0441 722 SUPERFAMILY L domain-like 79 360 - -
Lal25g0441 722 MobiDBLite consensus disorder prediction 641 665 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0441 Lal-Chr25 3036926 3039094 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0441 28 427 Leucine-rich Repeat extension Gene Families AT3G24480 69.630 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0441 - - gmx:106799218 610.912