Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0440 ATGAATGGAAATAAGTCGAAGAAACAGGACTCTAAAAAAGTTTCTTTTCTCAGCAATCAGCCTTATAGGAAGCAACATCGGAAGGGGGAAAACCCCATGCGGTTCATACCAGATCCTGATATGCCTTCTGGTTTTGGACGTTCAAACTCCTGGATCTGTAAAAATTCAGCTTGTAGAGCAGTTCTATCTAAAGATGACACATTTTGTAAACGGTGCTCTTGTTGTATTTGCCACCATTTTGATGATAACAAGGACCCTAGTCTTTGGTTGGTATGCACATCTGAGTCTGCTCAAGGGAACTCTTGCGGATTGTCTTGCCATATCGAGTGTGCCCTTCAACATGAAAAAGTGGGAGTTGTTGATCATGGGCAGCTAATGCAATTAGATGGTGGTTACTGTTGTGCATCCTGTGGCAAAGTGACTGGGATAATTGGATGTTGGAAGAAGCAGCTAAGTATAGCAAAAGATGCTCGGCGTGTAGATGTACTATGTTACAGGATATATTTGAGCTACAGGCTTCTGGATGGGACGTCAAGATTTAAAGAATTGCATGAGATGGTAAAAGAGGCAAATGCTAAACTGGAAACTGAAGTAGGTCAGGTTAATGGGGTTTCTGCCGAGATGGCACGTGGCATTGTTAGCAGACTTCCTATTGCAAGTGATGTACAGAAACTATGCTCTCTTGCTATTGAGAAAGCTGATGAGTGGATGGCCACTGTTCCCGATGTAAATACAGAATCGAGAGAGGGATCACTTCCTGCTGCCTGCAAGTTTGTTTTTGAAGAGGTAACAAATTTCTCGGTGAAAATCATTTTAATTCAAACGCCGAATGCATCTTCTGATCTCATTAAGGGGTACAAGCTCTGGTATTACAAGAGTAGGGATGAATCACACACAGAAGATCCCGTTTGTGTGTTTCCCAAAATTCAGAGGAGGATTTTGATATCTGACCTCCAGCCTTGCACAGAATATACTTTTCGGATTATATCTTTTACCGAAATCGGTGACCTGGGTCATTCTGAGGCAAAGTGTTTCACCAAGAGCATCGAAATATTGGATAAGAATTCCTCTTCGATGGTTGCTATGAATCATAAAAAGGAGAACCTTCAAACTGGAGGCAATTCTTATGGCTCCAAAATGGAAGACTCTAGATTTAAGGTTTGCGACCTTGGAAATTTTTTGCGTTTTGCTTGGACTCAAGAACAAGGTTGCTTGGAGGGGTTTTGCTGTGATGGTAAGAAAAATTGCTGTGGACAAAGTGAAACAATCAAGCCTAGCGATCCAAAAGAGCAGTTACCTTCATTTTCGCGAGGCCTTGATTTAAATGTCGTTTCGATGCCTGATTTAAATGAAGATCTAACACCTCCTTTTGAGTCTTCCAGGGATGAAGGCAACGGTTGCACATTGCAGCAGGTTGTTGAGGCAGACGATGCTGCTTCTCATGATTTAGAGAAAGCAAGATCACATGGCAGTGGTGATTCCCAAAACTGGGCTCATGGTCCAACCGGAGAAGTGCCAGCTGTTGATTCTCGCATAGATGCGTGTAGGAAAAGGGTAGCAAGTACAAATGAAGAGACACCTGACTGTGACAGCACTTTGATAAATGGATCTCCTTTACGTGTACCCGATGGTTCATTATCCTTAGACGAGAACTTTGAGTACTGCGTGAAAGTTATTCGTTGGCTAGAATGTCAGGGTCATATCAAACAGGAGTTTAGGTTGAAGTTGCTGACATGGTTTAGTTTGAGGTCGACCGAGCAAGAACGTAGGGTCGTTAATACCTTCATTCAAACTCTGATCGATGATCCAAGTAGTTTGGCTGGGCAGCTAGTTGACTCATTTTCTGATATCATATCCAATAAGAGGCCAAGAAATGGGTTCTGGTTGGTTCCTTCTCTGAGTTTAAAGTCTTCACCTTTGTTTTCCATTCATTTTTCTCAAAAGGACAAAACTTTAATATGTATGCCTCATAAAAATTCCACCTTTAGCTTTATTACTCCAAGAGCTGCTTCTGCTGAAGTTGGCTCTTCTTCAGCATCAACAGTAACAGCCGAGGATGATGTGTTAAAAGCTTTGTCTCAGATCATTGATCCAGACTTTGGAACAGATATTGTCACATGTGGATTTGTGAAAGATCTGCAGATTGATAACGCTCTCGGGGAGGTATCGTTTCGGTTAGAGCTCACTACACCAGCATGTCCAATCAAGGACGTGTTTGAGCAGAAGGCGAATGAAGTGGTGGCAATGATTCCTTGGGTCAAGAATGTAAAAGTTACAATGTCTGCACAACCAGCAAAACCTATATTTTCGGAGCAACTTCCGGCAGGTCTTCAGACAATTTCGAATATTGTGGCTGTGTCCAGTTGCAAGGGCGGTGTGGGAAAATCAACTATAGCAGTAAACCTTGCTTACACTTTGGCTGATATGGGTGCTAGAGTTGGTATATTTGATGCTGATGTTTACGGCCCAAGCTTACCAACTATGGTCTCGCCTGAAAACCGAGTGTTAGAAATGAATGCAGAGAAGAGAACGATAATTCCAACTGAATACTTGGGAGTCAAGTTGGTCTCTTTTGGATTTGCTGGACAAGGACGGGCAATTATGCGTGGCCCAATGGTTTCTGGAGTCATTAACCAGCTTCTGACTACTACTGAGTGGGGCGAGTTGGATTACCTAATTATCGACATGCCTCCTGGAACTGGAGATATTCAACTCACTTTATGCCAGATAGTCCCATTAACTGCTGCTGTAATTGTTACCACTCCTCAAAAGCTATCGTTCATTGATGTTGCAAAAGGAGTTCGGATGTTTTCTAAACTTAAGGTGCCATGCGTTGCTGTTGTGGAGAACATGTGTCATTTTGATGCTGATGGAAAACGATATTACCCATTTGGTAGAGGTTCAGGTTCTCAGGCATGGATAGCATTTCTGACTGTTGTTCAGCAGTTTGGAATACCTCATCTATTTGATCTGCCTATTAGACCAACTCTATCTGCTTCCGGAGATAGTGGAATGCCTGAAGTGGTCGCTGATCCTCAAGGGGAAGTTTCCAAGATATTCCAAAATCTAGGAGTATGTGTTGTGCAGCAATGTGCCAAGATACGCCAACAAGTTTCAACTGCTGTCACCTATGATAAATCGGTGAAGGCAATTAAAGTGAAGGTACCGAATTCAGATGAAGCATTCTTTCTGCATCCTGCGACAGTGCGACGTAATGATCGATCTGCTCAGAGTGTGGATGAATGGACGGGGGAACAGAAATTGCAGTACAACGATGTTCCTAACGATATTGAACCTGAAGAAATTCGGCCAATGGGAAATTATGCAGTTTCGATAACTTGGCCCGATGGGTTCAGTCAGATTGCTCCTTATGATCAGCTACAAATGATGGAAAGAGTAGTTGATATTCTTCAACCAACTATACAAGCATGA 3432 0.426 MNGNKSKKQDSKKVSFLSNQPYRKQHRKGENPMRFIPDPDMPSGFGRSNSWICKNSACRAVLSKDDTFCKRCSCCICHHFDDNKDPSLWLVCTSESAQGNSCGLSCHIECALQHEKVGVVDHGQLMQLDGGYCCASCGKVTGIIGCWKKQLSIAKDARRVDVLCYRIYLSYRLLDGTSRFKELHEMVKEANAKLETEVGQVNGVSAEMARGIVSRLPIASDVQKLCSLAIEKADEWMATVPDVNTESREGSLPAACKFVFEEVTNFSVKIILIQTPNASSDLIKGYKLWYYKSRDESHTEDPVCVFPKIQRRILISDLQPCTEYTFRIISFTEIGDLGHSEAKCFTKSIEILDKNSSSMVAMNHKKENLQTGGNSYGSKMEDSRFKVCDLGNFLRFAWTQEQGCLEGFCCDGKKNCCGQSETIKPSDPKEQLPSFSRGLDLNVVSMPDLNEDLTPPFESSRDEGNGCTLQQVVEADDAASHDLEKARSHGSGDSQNWAHGPTGEVPAVDSRIDACRKRVASTNEETPDCDSTLINGSPLRVPDGSLSLDENFEYCVKVIRWLECQGHIKQEFRLKLLTWFSLRSTEQERRVVNTFIQTLIDDPSSLAGQLVDSFSDIISNKRPRNGFWLVPSLSLKSSPLFSIHFSQKDKTLICMPHKNSTFSFITPRAASAEVGSSSASTVTAEDDVLKALSQIIDPDFGTDIVTCGFVKDLQIDNALGEVSFRLELTTPACPIKDVFEQKANEVVAMIPWVKNVKVTMSAQPAKPIFSEQLPAGLQTISNIVAVSSCKGGVGKSTIAVNLAYTLADMGARVGIFDADVYGPSLPTMVSPENRVLEMNAEKRTIIPTEYLGVKLVSFGFAGQGRAIMRGPMVSGVINQLLTTTEWGELDYLIIDMPPGTGDIQLTLCQIVPLTAAVIVTTPQKLSFIDVAKGVRMFSKLKVPCVAVVENMCHFDADGKRYYPFGRGSGSQAWIAFLTVVQQFGIPHLFDLPIRPTLSASGDSGMPEVVADPQGEVSKIFQNLGVCVVQQCAKIRQQVSTAVTYDKSVKAIKVKVPNSDEAFFLHPATVRRNDRSAQSVDEWTGEQKLQYNDVPNDIEPEEIRPMGNYAVSITWPDGFSQIAPYDQLQMMERVVDILQPTIQA 1143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0440 1143 MobiDBLite consensus disorder prediction 478 506 - -
Lal25g0440 1143 ProSitePatterns Mrp family signature. 886 902 IPR000808 GO:0005524
Lal25g0440 1143 Gene3D - 679 773 IPR034904 -
Lal25g0440 1143 MobiDBLite consensus disorder prediction 1 42 - -
Lal25g0440 1143 Gene3D - 776 1040 IPR027417 -
Lal25g0440 1143 CDD FN3 276 336 IPR003961 GO:0005515
Lal25g0440 1143 Pfam PHD - plant homeodomain finger protein 53 171 IPR032881 -
Lal25g0440 1143 Pfam NUBPL iron-transfer P-loop NTPase 780 1023 IPR033756 -
Lal25g0440 1143 ProSiteProfiles Fibronectin type-III domain profile. 252 351 IPR003961 GO:0005515
Lal25g0440 1143 CDD Mrp_NBP35 782 999 - -
Lal25g0440 1143 Gene3D - 1041 1131 IPR038492 -
Lal25g0440 1143 PANTHER VIN3-LIKE PROTEIN 1 5 627 - -
Lal25g0440 1143 Gene3D Immunoglobulins 256 349 IPR013783 -
Lal25g0440 1143 SUPERFAMILY Fibronectin type III 268 340 IPR036116 GO:0005515
Lal25g0440 1143 Hamap Iron-sulfur cluster carrier protein. 775 1039 IPR019591 GO:0005524|GO:0016226|GO:0051536|GO:0140663
Lal25g0440 1143 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 782 1034 IPR027417 -
Lal25g0440 1143 Pfam Iron-sulfur cluster assembly protein 685 759 IPR002744 -
Lal25g0440 1143 CDD PHD_VIN3_plant 73 137 - -
Lal25g0440 1143 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 684 765 IPR034904 -
Lal25g0440 1143 Pfam Gamma-butyrobetaine hydroxylase-like, N-terminal 1062 1120 IPR010376 -
Lal25g0440 1143 PANTHER VIN3-LIKE PROTEIN 2-RELATED 5 627 IPR044514 GO:0010048|GO:0040029
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0440 Lal-Chr25 3013989 3028439 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0440 49 626 PHD Gene Family AT3G24440 48.983 1.08e-172 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0440 - - gsj:114418583 1091.64