Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0431 ATGGAAGAGGGTGAGGAATGTAATTTCACTCCCAATAATGTGATGTCATCTGAAGTTGTTGCTTCAGAGGCAGAAACGACGTCGTTGGATGTTCCGGCCAAGAAGCTGGCGAGGCAGCTTGATTTCACAGCCTCGCAGTCGCAACCGCAGCTGCAGTCTTTGATGCCGCAACCGGTGGTTGTGATGCCGGTGCTGCGGCCGCTGCCTCATCCTTCCGTCAGGGTTGGGAAACCAGGTTCTCCAAAATCAAGTTCAAGACTTAACTTCAAAGTGAAAGACACTACTCCTAAGAAGAAAAAGCAGTGCAATTGTAAACACTCTAAATGCTTAAAGCTATATTGTGAATGTTTTGCATCTGGAATATATTGTGATGGTTGCAACTGCGTAAATTGTTTTAACAATGTTGAAAATGAAGCTGCTAGACGAGAAGCTGTTGAAGCTACTTTAGAGCGCAATCCAAATGCATTTAGGCCAAAAGTTGCAAGCAGCCCTCATGGGATACATGATACAAGGGAGGAGGCTGGGGAAGTTTTAATATTAGGAAAGCATAATAAGGGTTGCCATTGCAAAAAATCTGGGTGCCTCAAGAAGTACTGTGAATGCTTCCAAGCCAACGTTCTTTGTTCTGAAAATTGTAAATGCATTGACTGCAAGAATTTTGAGGAAAGTGAAGAGAGACAGGCTTTGTTTCATGGTGATCAAAATAAAAACATGGCATATATTCAGCAGTCAGCAAATGCTGCCGTAACAGAAGCTATTGGTCCTTCTGGTTATTCATCGCCTCCAGGATCCATCAAGAAAAGAAGACGTCAGGGACCCTTCATTGGGACAACAACCAAGGATCCATCCATTAGCAAGTCGGGACAACAGATAAACCATGTCAGGGGTCCAGTACCTAGCTCATCCTTGTCTTCTATCCAAAGATCTCATGTTGGAACCGCAATGTTAGGTCCTTCAAAATTTATGTACAGATCTCCTTTAGCAGACATCATACAACCACAGCACTTGAAGGAGCTTTGCTCAGCTCTGGTGCTAGTATCTGGGCAAGCTGCAAAGCTGGTTGCAGATCATAAAATTTCAATGGAAAGGCGTACAGAAGATCAGATAGAAACTTCTCTTACTTCTTCCACTCAAGAGCAGTTACCAAGTCAAATTGATGGTGAAGTTGGAAAAGCTATTGCTGATGATTGTTTGAGTGCAAACAAAACAGATAAAATCAGCCCAGATAATTCCAGTTCAGATGGCACTGATGTCTCGAAAGGGAGGCCAGTGTCACCTGGGACGTTAGCTTTGATGTGTGATGAGCAAGATACAATGCCCATGACAGCTGCTTCCCCTGTTGGGTCAATTTCCCATGCCTGCAGCACATCTTCGCAATTTCCATATGGTCAAGGAATGGCAGAGGTCTATGCTGAGCAAGAAAGGACTGTATTAACAAAGTTCAGAGATTTTCTCAATGGGGTTATCAATATGGGAGAAATAAACGGCAAGTTAATTTTTTCCTCTAAGACAAAGTGTTCTTCATTTGCCACAAGTGAATTACAGAGTCAAAAAGACTCAATCAACAATAGCACTAGAACTGCTAGTACCGAGATAGTGGATAAGCAGCGAGCCGGTTGCAATGGTGTTACCAAAGCTGTTCCACATGTGGCCACCACTTCAGCATCTATTATCCCCGAAATGACTTATTCTTCATTTGCTAGAAGTGAATTAGAGAGTAAAAAGGACCCACTCATAATGATGAATGGGGAGAGACCCACTCATAATGGTGATAACAAAGCTATTGTTCCACCTGTGGCCACAACTTCACCATCTATGATTCATGACCGGACCCTGAAGTTCAAAACTAAGAATGATGTGCAGAGATAA 1869 0.4307 MEEGEECNFTPNNVMSSEVVASEAETTSLDVPAKKLARQLDFTASQSQPQLQSLMPQPVVVMPVLRPLPHPSVRVGKPGSPKSSSRLNFKVKDTTPKKKKQCNCKHSKCLKLYCECFASGIYCDGCNCVNCFNNVENEAARREAVEATLERNPNAFRPKVASSPHGIHDTREEAGEVLILGKHNKGCHCKKSGCLKKYCECFQANVLCSENCKCIDCKNFEESEERQALFHGDQNKNMAYIQQSANAAVTEAIGPSGYSSPPGSIKKRRRQGPFIGTTTKDPSISKSGQQINHVRGPVPSSSLSSIQRSHVGTAMLGPSKFMYRSPLADIIQPQHLKELCSALVLVSGQAAKLVADHKISMERRTEDQIETSLTSSTQEQLPSQIDGEVGKAIADDCLSANKTDKISPDNSSSDGTDVSKGRPVSPGTLALMCDEQDTMPMTAASPVGSISHACSTSSQFPYGQGMAEVYAEQERTVLTKFRDFLNGVINMGEINGKLIFSSKTKCSSFATSELQSQKDSINNSTRTASTEIVDKQRAGCNGVTKAVPHVATTSASIIPEMTYSSFARSELESKKDPLIMMNGERPTHNGDNKAIVPPVATTSPSMIHDRTLKFKTKNDVQR 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0431 622 ProSiteProfiles CRC domain profile. 98 222 IPR005172 -
Lal25g0431 622 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 185 219 IPR005172 -
Lal25g0431 622 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 99 134 IPR005172 -
Lal25g0431 622 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 5 ISOFORM X1 60 550 - -
Lal25g0431 622 MobiDBLite consensus disorder prediction 276 305 - -
Lal25g0431 622 MobiDBLite consensus disorder prediction 400 428 - -
Lal25g0431 622 MobiDBLite consensus disorder prediction 255 305 - -
Lal25g0431 622 MobiDBLite consensus disorder prediction 403 419 - -
Lal25g0431 622 SMART CXC_2 182 223 IPR033467 -
Lal25g0431 622 SMART CXC_2 97 137 IPR033467 -
Lal25g0431 622 PANTHER TESMIN/TSO1-RELATED 60 550 IPR028307 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0431 Lal-Chr25 2927152 2935825 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0431 32 515 CPP Transcription Factor Family AT4G29000 51.977 9.01e-169 493
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Lal25g0431 TCR 1.6e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0431 - - lang:109358342 903.279