Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0422 ATGGACCCACCTCAACCCAAGTTCAGGACCATTCAAACCCGACCCGATATCACATCAAAATACAAAATCATAAACCGGGTCGGGTCAGGTTCCTACGCCGACGTCTACCGTGGCCACCGCCTCTCCGATGAAACAACAGTAGCTCTAAAAGAAGTCCACGACCAACAATCAGCGTTCAGAGAAATCGAAGCTTTAAGAATCCTTCAAGGGTCACGAAACGTTGTCGTAATGCACGAGTTCTTCTGCTGCGAAGATGAGGACGTTGTGATTGTGCTTGAGTTTCTGAGGAGTGATCTTGTGACTGTGATGAAAGAGAGTGATAATGGGGAAATGGGTATTGGAAAAGTGAAGAGTTTGATGATGCAGATTCTGTGTGGGGTTGATGCGTGTCATAGGAATATGATATTGCATAGGGATTTGAAACCGAGTAATTTCTTGATTTCTGATGATGGGGTCCTCAAGTTGGCTGATTTTGGACAGTGTGATGGTCCCGGTGGGGATAGTGGTGCTCTCTGGTGCGGTGGTATTGGTAAGAGTGGTGACATTGATGGTCATTTTGATGTAAAGAAGAAAAAAGGTACAAGAACATTGTTTGTGCAGGCAAGGATACTAATGGAGCCTGGATTTGATGCTACAGAGGAGAACCCAGCACCCCCATATGAGCTAGATTCTTCAACTACTGAAACTTTGCTTCGACATTCCGAGGCTTTTCCTGAGCCAGAGGACTTAAACCAAACAGGATATGGAGGAAATCAAGAACATGGAACCACAAATCATGAAGAATATTTTAGAGTTTTAGATGAGCTGAAGACTAAAAGCTACATGTATGACACTGACAAGGATACAATCATCTGTGATGGAAATAACTCTTGTCTTGCAACATGCACAACAAATGACACAGATGATGAAATCTGGAAAGATACTTTTACATACGAAGCCGATGAAGGAGGGAATGAACTCGGTTGTCTCACATCATGCATCGGATCTCGTTGGTACAAGGCTCCTGAACTACTTTACGGATCCACGGACTACGGTTTAGAGGTCGATCTCTGGTCTTTGGGGTGTATATTTTCCGAGCTCTTAACTCTTAAGCCTTTGTTCCCTGGAACATCTGATATAGATCAACTCAGTAGAATTATCAGTGTAATGGGCAACCTCAATGAGGAATCTTGGCCTGATTGTTCTAAGCTTCCAGATTATACAAGAATCTCATTTAGTAAGGTGGAAAACCCTACTGGTCTTGAAACATGTCTGCAGGATCGGTCGGCGGATGAAGTCTCTCTAGTGAAAAAACTGCTTTTTTATGATCCTTCTAAGAGAGCCACAGCAATGGAGCTACTTCATGACAAGTACTTCAATGAATAG 1365 0.433 MDPPQPKFRTIQTRPDITSKYKIINRVGSGSYADVYRGHRLSDETTVALKEVHDQQSAFREIEALRILQGSRNVVVMHEFFCCEDEDVVIVLEFLRSDLVTVMKESDNGEMGIGKVKSLMMQILCGVDACHRNMILHRDLKPSNFLISDDGVLKLADFGQCDGPGGDSGALWCGGIGKSGDIDGHFDVKKKKGTRTLFVQARILMEPGFDATEENPAPPYELDSSTTETLLRHSEAFPEPEDLNQTGYGGNQEHGTTNHEEYFRVLDELKTKSYMYDTDKDTIICDGNNSCLATCTTNDTDDEIWKDTFTYEADEGGNELGCLTSCIGSRWYKAPELLYGSTDYGLEVDLWSLGCIFSELLTLKPLFPGTSDIDQLSRIISVMGNLNEESWPDCSKLPDYTRISFSKVENPTGLETCLQDRSADEVSLVKKLLFYDPSKRATAMELLHDKYFNE 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0422 454 PANTHER CYCLIN-DEPENDENT KINASE 10 318 454 - -
Lal25g0422 454 PANTHER CYCLIN-DEPENDENT KINASE 10 19 161 - -
Lal25g0422 454 SUPERFAMILY Protein kinase-like (PK-like) 10 453 IPR011009 -
Lal25g0422 454 Gene3D Transferase(Phosphotransferase) domain 1 265 454 - -
Lal25g0422 454 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
Lal25g0422 454 PANTHER CELL DIVISION PROTEIN KINASE 318 454 - -
Lal25g0422 454 PANTHER CELL DIVISION PROTEIN KINASE 19 161 - -
Lal25g0422 454 SMART serkin_6 21 452 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal25g0422 454 Pfam Protein kinase domain 21 161 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal25g0422 454 Pfam Protein kinase domain 323 452 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal25g0422 454 ProSiteProfiles Protein kinase domain profile. 21 452 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal25g0422 454 ProSitePatterns Protein kinases ATP-binding region signature. 27 50 IPR017441 GO:0005524
Lal25g0422 454 Gene3D Transferase(Phosphotransferase) domain 1 10 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0422 Lal-Chr25 2871329 2874008 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0422 10 454 Core Cell Cycle Gene Families AT4G28980 52.423 1.61e-157 453
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CCRK Lal25g0422 Pkinase 1.9e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0422 - - gmx:100802698 570.466