Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0412 ATGACAAAATCATCCAAATTTTGTGTTAAATTCTCATTATACTCTCTTCTAATCTTCTTTCTTATCCTGAACCATGCAAAATCTTATACTAATATGTATAATGAAGAACATATAGTCCTAATGAATATAAAACAGTACCTACAAAACCCACCATATCTTAGTCATTGGACCCTATCAAACTTTTCTCACTGTTCTTGGCCTGAACTGAACTGCACCAATGGTTCTGTTACTGGGTTGTCTTTGGTTAAGTCTAATATAAACCAAACAATACCACCTTTCATATGTGACCTCAAAAATCTTACACATGTTGACTTTAGTAAGAATTATATTCCTGGAGAGTTTCCAACATATCTTTATAATTGTTCCAAGCTTGAGTATTTGGACTTGTCTATGAATAACTTGTATGGCAAGGTTCCTTATGATATTGAAAGTTTGTCTAATTTGAAGTATCTTAACCTTGGTTCAACCTCTTTTTCTGGTGATATTCCTGTGAGTATTGGAAGGTTGAAGGATCTTAGAGTACTTAAACTTCAATATTGTTTGTTCAATGGGACTTACCCTGTTGAAATTGGCAACTTGTTTAATCTTGAAACCTTGGATTTGTCGTCTAATTCTGAGCTTCCGCAGTCGAGTTTGCCATCGAGTTGGACTAAGTTGAAGAAATTGAAGGTGTTTTATATGTATGGCTGCAACTTGGTTGGGGAAATTCCTGAAAGCATTGGAGAAATGGTTGCATTGGAGAAGTTGGATATGTCAGAAAACAATCTATCTGGGCAGATTCCGAAAAGTTTGTTATTGCTGAAGAATCTGACCAAACTATTTCTTCAACACAATAGTCTATCTGGAGAGATATCGGGTGCGATTGAAGCATTAAACTTAACCGCCATCGATCTCACGAAGAATGATCTAACAGGGAAAATACCAGATGATTTTGGAAATCTCACAAAGTTAACAGGCTTGTGCTTGTCTAGAAATAAGTTTTCAGGGGAGTTACCCGAAAACATAGGCCGTTTTCGATATCTGAAAGATTTTCGTGTCTTTTTCAACAATCTATCAGGTACTCTTTCTCCGAATTTTGGCCGATCCTCGAAGCTAAGATCCTTCCACATTTCTTCCAATAAAATTTCAGGAAGGCTACCAGAGAATTTATGCTATCATGGTGAGTTACTTAATTTAACTGCTTATGACAATAATCTCATTGGAGAGTTGCCAGAATCACTAGGAAATTGTAGTAGTCTTTTGGAGTTAAAAATTTCCAATAATCAGTTTTCTGGTAACATTCCTAGTGGTCTTTGGAAATCTTCCAATTTGATAAATTTCATGGTGAGTCAGAATAAGTTTACTGGTGAACTTCCAGATAGATTGTCTTCAACTATTTCGCGCTTTGAGATAAGTTACAATCAGTTTTCGGGTAGAATTCCTGCTGGAGTATCTTCCTTGAAGAATGTTGTAGTGTTTAGTGCTAGTAAGAATTTCTTCAATGGAAGTTTTCCTAAAGAGCTAGCAACTCTTTCCAAGCTAACAACTCTTTTGCTAGACCAGAATCATCTCACTGGGTCAATTCCATCAGATATAATTGCGTGGAAGTCGTTAGTGACTCTTAATTTGAGCCAAAACCAACTCTTTGGGCAAATCCCAGATACAATTGGTCAATTACCTGTCCTTAGCCAGCTCGATCTGTCGAAAAATCAATTCTCCGGAAAAATTCCTTCTGAACTTCCTAGACTCACCAATCTCAATCTGTCCTCGAATCGTTTGACAGGGCGAATTCCAAGTGAAGTTGGAATATCTGCATTTGCCAGCAGCTTTTTGGACAATCCTGGTCTCTGTACAGATAACCCAGCACTGAACCTTACCTTGTGCAACGCCGGTCCACAAAGGCGAACCGAAGGTTCATCTTGGTTTCTCCCTTTGATTGTAAGCCTGATAGCAGTATTCTTCGGATTGGCTTTGTTGGCATCATTCTTGATCATTAGACTCATCAGAAAAAGAAAGCAACGTTTGAATAACTCATGGAAACTCATTTCCTTTCAAAGGCTGAGTTTCACAGAATCAAACATAGTATCATCATTGACAGAACATAATATCATTGGCCGTGGTGGATATGGCACAGTATACCGTGTCCCTGTCGATGATTTAGACTATGTTGGTGTGAAAAAGATTTGGAATAACAGAAAGTTAGACAAGAAGCTAGTGAGTTCCTTTCACGCCGAAGTTAAAATATTGAGCAATATTCGTCATAACAACATTGTGAAGTTGTTGTGCTGTATCTCGAATCAGGACTCTATGCTCCTTGTATATGAATATCATGAAAACCGAAGCCTCGATAGGTGGCTATGCAAGAAGAGTAAGTCATCAAGCATGTCAGGTTCAAACCATCATGTTGTACTTGATTGGCCAAAGAGAATGAAAATTGCCATTGGGATTGCTCAAGGTTTGTGCTATATGCACCATGATTGTTCACCACCTATTGTTCATAGAGATGTGAAAACAAGCAACATACTTTTGGATGTTCAGTTCAATGCAAAAGTTGCTGATTTTGGTTTGGCTAGGATGTTGATCAAGCCAGAAGAACTCGAGACAATGTCAAATGTTGTTGGCTCATTTGGATATATTGCTCCAGAATATATTAAAACAACCCGAGTCAGCGAAAAGGTCGATGTCTTCAGCTTTGGGGTTATCTTATTGGAACTGACAACTGGGAAAGAAGCTACCTATGGAGATGAACACTCATCTCTTGCAGAGTGGGCATTGCGCCAAGTTCAGTTAGGAAGCGATATCTATGAACTGCTAGACAAAGATGTAATGGAACTCGGTTATGTGGATGAAATGCGCATTGTTTTCAAGCTTGGGATTATGTGCACTGCAACACTACCTGCTAGTAGGCCTTCCATGAAGGAAGCTGTGCAGATATTGCAGCGATGCGGCGAAGGATTTACTTTTGCAGAGAGGAATATAGGGAAATATGATGTTGTTCCCCTTCTTAAGAATTCAAGAAGGAAGCATAGTTTTGATTTTACTGATAATGATAGTGGATAA 3039 0.3827 MTKSSKFCVKFSLYSLLIFFLILNHAKSYTNMYNEEHIVLMNIKQYLQNPPYLSHWTLSNFSHCSWPELNCTNGSVTGLSLVKSNINQTIPPFICDLKNLTHVDFSKNYIPGEFPTYLYNCSKLEYLDLSMNNLYGKVPYDIESLSNLKYLNLGSTSFSGDIPVSIGRLKDLRVLKLQYCLFNGTYPVEIGNLFNLETLDLSSNSELPQSSLPSSWTKLKKLKVFYMYGCNLVGEIPESIGEMVALEKLDMSENNLSGQIPKSLLLLKNLTKLFLQHNSLSGEISGAIEALNLTAIDLTKNDLTGKIPDDFGNLTKLTGLCLSRNKFSGELPENIGRFRYLKDFRVFFNNLSGTLSPNFGRSSKLRSFHISSNKISGRLPENLCYHGELLNLTAYDNNLIGELPESLGNCSSLLELKISNNQFSGNIPSGLWKSSNLINFMVSQNKFTGELPDRLSSTISRFEISYNQFSGRIPAGVSSLKNVVVFSASKNFFNGSFPKELATLSKLTTLLLDQNHLTGSIPSDIIAWKSLVTLNLSQNQLFGQIPDTIGQLPVLSQLDLSKNQFSGKIPSELPRLTNLNLSSNRLTGRIPSEVGISAFASSFLDNPGLCTDNPALNLTLCNAGPQRRTEGSSWFLPLIVSLIAVFFGLALLASFLIIRLIRKRKQRLNNSWKLISFQRLSFTESNIVSSLTEHNIIGRGGYGTVYRVPVDDLDYVGVKKIWNNRKLDKKLVSSFHAEVKILSNIRHNNIVKLLCCISNQDSMLLVYEYHENRSLDRWLCKKSKSSSMSGSNHHVVLDWPKRMKIAIGIAQGLCYMHHDCSPPIVHRDVKTSNILLDVQFNAKVADFGLARMLIKPEELETMSNVVGSFGYIAPEYIKTTRVSEKVDVFSFGVILLELTTGKEATYGDEHSSLAEWALRQVQLGSDIYELLDKDVMELGYVDEMRIVFKLGIMCTATLPASRPSMKEAVQILQRCGEGFTFAERNIGKYDVVPLLKNSRRKHSFDFTDNDSG 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0412 1012 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 13 1003 - -
Lal25g0412 1012 Pfam Protein kinase domain 693 970 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal25g0412 1012 Gene3D Ribonuclease Inhibitor 388 477 IPR032675 -
Lal25g0412 1012 Gene3D Phosphorylase Kinase; domain 1 672 769 - -
Lal25g0412 1012 Gene3D Transferase(Phosphotransferase) domain 1 771 985 - -
Lal25g0412 1012 SMART serkin_6 691 971 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal25g0412 1012 SUPERFAMILY L domain-like 35 289 - -
Lal25g0412 1012 SMART LRR_typ_2 504 528 IPR003591 -
Lal25g0412 1012 SMART LRR_typ_2 193 214 IPR003591 -
Lal25g0412 1012 SMART LRR_typ_2 529 552 IPR003591 -
Lal25g0412 1012 SMART LRR_typ_2 243 267 IPR003591 -
Lal25g0412 1012 SMART LRR_typ_2 314 338 IPR003591 -
Lal25g0412 1012 SMART LRR_typ_2 573 597 IPR003591 -
Lal25g0412 1012 SUPERFAMILY Protein kinase-like (PK-like) 683 972 IPR011009 -
Lal25g0412 1012 Pfam Leucine rich repeat 506 565 IPR001611 GO:0005515
Lal25g0412 1012 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 13 1003 - -
Lal25g0412 1012 ProSiteProfiles Protein kinase domain profile. 691 980 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal25g0412 1012 SUPERFAMILY RNI-like 292 598 - -
Lal25g0412 1012 Gene3D Ribonuclease Inhibitor 33 185 IPR032675 -
Lal25g0412 1012 Gene3D Ribonuclease Inhibitor 290 387 IPR032675 -
Lal25g0412 1012 Gene3D Ribonuclease Inhibitor 186 289 IPR032675 -
Lal25g0412 1012 Gene3D Ribonuclease Inhibitor 478 617 IPR032675 -
Lal25g0412 1012 Pfam Leucine Rich Repeat 292 314 IPR001611 GO:0005515
Lal25g0412 1012 ProSitePatterns Serine/Threonine protein kinases active-site signature. 824 836 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0412 Lal-Chr25 2789793 2794338 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0412 36 1012 Receptor kinase-like Gene Family AT5G25930 49.545 0.0 921
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lal25g0412 Pkinase 1.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0412 - - gmx:100798963 1373.61