Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0406 ATGCATGTATTAACTCTTCCTCTTACTTCAAAATACTTCCTTTATTCTTATTCTCACACTCATCTATGTCTAAGATCTTCTTCCATGCCCACTTGTAATTTCAGTTATACAAACAATGATTTCAACCCCCTTTTCCTCCATTCACACTCTTACAGTTACATCGATAGGAATCATGAAAAGAAGAAGAAGAAAAAAAGAAATAGAGTGATTGTTGTGAGAGGAAGAAGCTATGGTGAATCTCCTTATGAGGTCCTTGGGGTATCTTCATCTGCTACTGTAGATCAAATCAAAAGGGCATATAGGAAACTTGCTCTTAAGTATCACCCAGATGTCAATAAAGAGGATAAGGCGCAGGAGAAGTTCATGAGGATAAAGCATGCATACAATACATTGCTAAATTCTAGTTCCCGCAGAAAATATGATTCTAGAGATCGGGGGTCTAATTTTTCATCTTCCTCTTCTGCAAATCCACGAACTGAAGAAGAATTTTATGGATTAGGGGACTTCTTTAAAGATCTTCAAGATGAATTCAGAAACTGGGAAGCCAATGCTGCTTCACAAGGAAAGCCGAAGAGCCTATGGGAGGAATTGGCGGAAATAGGAGAAGAATTTGTGGAGTTCCTTGAGAAAGAACTGAATATTGTTGATCCAGAAGTCAATGCAGAGAACGATGATAAAACACCTCAGGGATCTTGGAAAGGGACGCCCAGCAACAGTACTAAAGGCGAAGCTGACAAGGGAAACAAAAGCATAGACGATAACCTTGACGAAATAGAAGCCACTTTGGCTCAGTTAAAGAAGGAATTAGGCTTATAG 816 0.3909 MHVLTLPLTSKYFLYSYSHTHLCLRSSSMPTCNFSYTNNDFNPLFLHSHSYSYIDRNHEKKKKKKRNRVIVVRGRSYGESPYEVLGVSSSATVDQIKRAYRKLALKYHPDVNKEDKAQEKFMRIKHAYNTLLNSSSRRKYDSRDRGSNFSSSSSANPRTEEEFYGLGDFFKDLQDEFRNWEANAASQGKPKSLWEELAEIGEEFVEFLEKELNIVDPEVNAENDDKTPQGSWKGTPSNSTKGEADKGNKSIDDNLDEIEATLAQLKKELGL 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0406 271 MobiDBLite consensus disorder prediction 224 244 - -
Lal25g0406 271 MobiDBLite consensus disorder prediction 135 158 - -
Lal25g0406 271 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 55 269 - -
Lal25g0406 271 SMART dnaj_3 79 136 IPR001623 -
Lal25g0406 271 SUPERFAMILY Chaperone J-domain 46 140 IPR036869 -
Lal25g0406 271 Coils Coil 248 268 - -
Lal25g0406 271 ProSitePatterns Nt-dnaJ domain signature. 121 140 IPR018253 -
Lal25g0406 271 PRINTS DnaJ domain signature 82 100 IPR001623 -
Lal25g0406 271 PRINTS DnaJ domain signature 100 115 IPR001623 -
Lal25g0406 271 PRINTS DnaJ domain signature 116 136 IPR001623 -
Lal25g0406 271 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 55 269 - -
Lal25g0406 271 Pfam DnaJ domain 81 141 IPR001623 -
Lal25g0406 271 CDD DnaJ 81 133 IPR001623 -
Lal25g0406 271 Gene3D DnaJ domain 78 188 IPR036869 -
Lal25g0406 271 MobiDBLite consensus disorder prediction 218 255 - -
Lal25g0406 271 ProSiteProfiles dnaJ domain profile. 80 144 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0406 Lal-Chr25 2754423 2757910 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0406 75 142 C2H2 Transcription Factor Family AT1G74250 39.189 1.04e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0406 - - gmx:100812972 299.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0406 25 2754423 2757910 Lal25g0406 25 2754423 2757910 ECH