Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0396 ATGGCATCAATACCTCTAACGACGTCGTTTCCCCTTCTCCGATTACCCTCTTCCTCTAACCTCTTTCCAACTTCATCACTTCGCTATTCCACTCCCGCCATTTCTAAACATATAAAACGATGTCGTTTCAATCCATCACCTATATTAACCACTTCACATTACAATCTCAATAACACCAAACTTAACCGAACACTCTCCACCGTCAGAGCTTCCGCCGCCGCAGCTTCCGTCACTCCGTCACCATCTCCGCCGTCATCTCCGCCATGGCAAGGTGCTGCGATAAAACCTCTGATAGCTTCAATAGCAACAGGTGTTGTATTATGGTTTGTTCCTGTTCCTACTGGTGTGACACGGAACGCGTGGCAGTTACTCGCGATTTTCTTAGGTACGATCGTTGGGATTATCACGCAGCCATTGCCGTTAGGTGCGGTTGCTATATTAGGTCTTGGAGTTTCAGTTCTAACAAAAACGTTAACCTTCGCTGCGGCGTTTTCGGGATTTAGTGATCCGATACCGTGGTTAATCGCGCTCGCGTTTTTCTTCGCGAAAGGGTTCATTAAAACTGGTCTAGGTAACCGTGTTGCGTATCAATTCGTTTCACTTTTTGGTAGCTCGTCGTTAGGGTTAGGTTACAGTTTGGTTTTCAGCGAGGCGCTTTTGGCGCCGGCGATTCCGTCTGTTTCGGCGAGAGCCGGGGGGATTTTTCTCCCGTTGGTGAAGTCTCTGTGCGTTGCGTGTGGTAGCAACGTCGGAGATGGAACGGAGCATCGATTAGGGTCGTGGTTGATGTTGACTTGCTTCCAAACTTCGGTGATTTCGTCGGCGATGTTTCTGACGGCGATGGCGGCGAATCCTCTTTGTGCGACTCTGACTCTGAACTCGATTAATCAGACGATTGGGTGGTTGGATTGGGCAAAAGCGGCGATAGTGCCGGGTTTGGTGTCGTTGGTGGTGGTGCCGTTTTTATTGTATGTGATTTACCCGCCAACTTTGAAATCAAGTCCTGATGCGCCTAAACTTGCTAGAGAGAAGTTGCAGAAAATGGGGCCTATGACTACAAATGAGAAGATTATGACTGCCACCTTGTTTCTTACGGTGGGACTTTGGGTTTTTGGAGGGTTTCTTAATATAGATGCTGTAACTTCTGCAATTCTTGGATTAACTGTGCTCCTTGTTACCGGGGTTGTAACGTGGAAGGAGTGCTTAGGCGAGGGAGTTGCCTGGGATACTCTCACGTGGTTTGCTGCCCTCATTGCAATGGCTGGGTATTTGAACAAATATGGTCTTATTTCTTGGTTCAGCCAAACTGTAGTGAAGTTTGTTGGCGGATTAGGTCTGTCATGGCAACTATCATTCGGGATTCTAGTTCTTCTCTATTTCTACTCACATTACTTCTTTGCAAGTGGAGCTGCTCATATTGGTGCCATGTTTACTGCATTTTTGTCTGTTGCTTCTGCTCTGGGCACTCCACCATTTTTGGGTGCTATCGTGCTATCCTTCCTCTCCAACCTCATGGGTGGCCTTACCCATTATGGGATTGGTTCAGCTCCTGTGTTCTATGGTGCCAACTATGTGCCCCTTGCTAAATGGTGGGGCTATGGATTCCTTATAAGTATTGTTAACATTGTTATCTGGCTTGGAGTTGGGGGAATTTGGTGGAAGGCCATTGGCTTGTGGTAA 1680 0.4744 MASIPLTTSFPLLRLPSSSNLFPTSSLRYSTPAISKHIKRCRFNPSPILTTSHYNLNNTKLNRTLSTVRASAAAASVTPSPSPPSSPPWQGAAIKPLIASIATGVVLWFVPVPTGVTRNAWQLLAIFLGTIVGIITQPLPLGAVAILGLGVSVLTKTLTFAAAFSGFSDPIPWLIALAFFFAKGFIKTGLGNRVAYQFVSLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLPLVKSLCVACGSNVGDGTEHRLGSWLMLTCFQTSVISSAMFLTAMAANPLCATLTLNSINQTIGWLDWAKAAIVPGLVSLVVVPFLLYVIYPPTLKSSPDAPKLAREKLQKMGPMTTNEKIMTATLFLTVGLWVFGGFLNIDAVTSAILGLTVLLVTGVVTWKECLGEGVAWDTLTWFAALIAMAGYLNKYGLISWFSQTVVKFVGGLGLSWQLSFGILVLLYFYSHYFFASGAAHIGAMFTAFLSVASALGTPPFLGAIVLSFLSNLMGGLTHYGIGSAPVFYGANYVPLAKWWGYGFLISIVNIVIWLGVGGIWWKAIGLW 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0396 559 CDD ArsB_NhaD_permease 131 553 - -
Lal25g0396 559 Pfam Sodium:sulfate symporter transmembrane region 96 559 IPR001898 GO:0016020|GO:0022857|GO:0055085
Lal25g0396 559 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 49 559 IPR030676 -
Lal25g0396 559 PANTHER DICARBOXYLATE TRANSPORTER 1, CHLOROPLASTIC 49 559 - -
Lal25g0396 559 TIGRFAM dass: transporter, divalent anion:Na+ symporter (DASS) family 111 553 IPR001898 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0396 Lal-Chr25 2682124 2685904 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0396 1 558 Antiporters AT5G12860 79.469 0.0 850
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0396 - - vun:114169835 894.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0396 25 2682124 2685904 Lal25g0396 25 2682124 2685904 ECH