Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0392 ATGGCTGATAGGCATCAGCACCCAACAATAGTACAAAAGTTTGCTGGCCAGCTTCATTTGAGGTCCAACATTTCTTCACATGTTGCAAATTCTTATGGAGTACTGAAAATGCAGCAACATTTTTCACTCAAAAACTATCCAAATGCAGGGTTAAAGTGTCTTGAAATGCATGCATGCAAAGAAGCTACAACAAATACTTTGCACAATTATGTAGGTTCACATGTATTTGTAGCATCTCCATCAGAGAAAAGTTTTGCAAGCTTTGCCACTGATTTTCTGTTGGGTGGAGTTTCTGCTGCAGTGTCCAAGACTGCAGCTGCTCCTATCGAGCGCGTTAAGCTTCTAATTCAAAACCAAGATGAAATGATTAAGGCCGGTCGACTTTCTGAACCTTACAAGGGTATTGGAGATTGTTTTGGCAGAACATTCAAAGATGAAGGATTTTTTTCTCTATGGAGAGGAAATGCTGTCAATGTTATCCGTTACTTCCCAACGCAGGCCTTGAACTTTGCATTTAAAGACTACATTAAGAGTGTATTTAACTTCAAGAAAGACAAGGATGGGTATTGGAAATGGTTTGCAGGTAACTTGGCATCTGGTGCTGCAGCAGGAGCTGCATCATCGGTCTTCGTTTACTCGTTGGATTATGCTCGAACCCGACTCACCAATGATGCCAAGTCTTTTAAGAATGGTGGAGAGAGGCAATTCAATGGTTTGATTGATGTGTACAAGAAGACTCTTAAATCAGATGGTATTGTTGGCCTCTACCGTGGCTTCAACGTTTCTTTAGTTGGGATCATTGTCTACCGCGGTTTATACTTTGGACTCTATGATTCTTTGAAACCAGTACTCTTGGTTGGAACATGGCAGGATAGTTTCTTGGCTAGCTTTGGTCTAGGATGGGTAGTAACTATTGGTGCAACCATGGCATCCTATCCCTTGGACACTGTTCGTAGAAGAATGATGATGACTTCAGGTGAATCAGTCAAATATAAAAACACTTTGGATGTGTTCTCACAAATTATCAAGAATGAAGGTACAAAATCTCTCTTCAAGGGTGGTGGTGCAAACATTCTTCGTGCTGTTGCTAGTGCTGGTGTTCTTGCCAGTTATGACAAACTTCAGATGCTTGTAGTAGCAAAGTAG 1146 0.411 MADRHQHPTIVQKFAGQLHLRSNISSHVANSYGVLKMQQHFSLKNYPNAGLKCLEMHACKEATTNTLHNYVGSHVFVASPSEKSFASFATDFLLGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFGRTFKDEGFFSLWRGNAVNVIRYFPTQALNFAFKDYIKSVFNFKKDKDGYWKWFAGNLASGAAAGAASSVFVYSLDYARTRLTNDAKSFKNGGERQFNGLIDVYKKTLKSDGIVGLYRGFNVSLVGIIVYRGLYFGLYDSLKPVLLVGTWQDSFLASFGLGWVVTIGATMASYPLDTVRRRMMMTSGESVKYKNTLDVFSQIIKNEGTKSLFKGGGANILRAVASAGVLASYDKLQMLVVAK 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0392 381 ProSiteProfiles Solute carrier (Solcar) repeat profile. 191 283 IPR018108 -
Lal25g0392 381 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 1 381 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lal25g0392 381 ProSiteProfiles Solute carrier (Solcar) repeat profile. 86 179 IPR018108 -
Lal25g0392 381 PRINTS Adenine nucleotide translocator signature 88 100 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lal25g0392 381 PRINTS Adenine nucleotide translocator signature 132 153 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lal25g0392 381 PRINTS Adenine nucleotide translocator signature 165 177 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lal25g0392 381 PRINTS Adenine nucleotide translocator signature 191 204 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lal25g0392 381 PRINTS Adenine nucleotide translocator signature 296 312 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lal25g0392 381 Gene3D Mitochondrial carrier domain 89 380 IPR023395 -
Lal25g0392 381 ProSiteProfiles Solute carrier (Solcar) repeat profile. 291 377 IPR018108 -
Lal25g0392 381 SUPERFAMILY Mitochondrial carrier 85 373 IPR023395 -
Lal25g0392 381 PANTHER ADP,ATP CARRIER PROTEIN, MITOCHONDRIAL 1 381 - -
Lal25g0392 381 Pfam Mitochondrial carrier protein 292 378 IPR018108 -
Lal25g0392 381 Pfam Mitochondrial carrier protein 190 284 IPR018108 -
Lal25g0392 381 Pfam Mitochondrial carrier protein 87 182 IPR018108 -
Lal25g0392 381 PRINTS Mitochondrial carrier protein signature 91 104 IPR002067 GO:0055085
Lal25g0392 381 PRINTS Mitochondrial carrier protein signature 104 118 IPR002067 GO:0055085
Lal25g0392 381 PRINTS Mitochondrial carrier protein signature 154 174 IPR002067 GO:0055085
Lal25g0392 381 PRINTS Mitochondrial carrier protein signature 206 224 IPR002067 GO:0055085
Lal25g0392 381 PRINTS Mitochondrial carrier protein signature 256 274 IPR002067 GO:0055085
Lal25g0392 381 PRINTS Mitochondrial carrier protein signature 300 322 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0392 Lal-Chr25 2643807 2647769 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0392 1 381 Antiporters AT5G13490 70.130 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0392 K05863 - gmx:100800843 571.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0392 25 2643807 2647769 Lal25g0392 25 2643807 2647769 ECH