Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0385 ATGGAGTCAGATCCTCAGAAAAATAATTCTTCATCTGGTTTAACACGTTATAAATCAGCACCAAGTTCATATTTCAACAATATCATTGATAAGGATTTCTATGAGCACATTTTCAACCAACCTTCTAGCCCTGAAACAGAACAAATCTTCTCAAGATTTATGAATAGTATAAGTGGTAGTGGTGGTGGTGATGTTACTCCTGCAGCATTAGAAGAAGATTCACATCCTCATAATTTCTCACCAGTGAAAGAAGAGATTATTATTAACCAAGAGGTAAATTATGAACCTGTGGTGTGGAAGGAGCAACAACAGCATTGTGATATTAGTAGTAATTATTCTTCTGGTGTTCATGGTTTTTACCAAAGTTCTGCAAGACCACCTTTGCCAAATCAAAACCTTAACTCAGGTATGGATGGAACATATTCATTTGGTGTTAATAGGTTGCAGCAAATGAAGACTGGTTCTAGGAATAATCTTATCAGACATAGTAGTTCACCTGCAGGACTATTTTCCCAAATCAACATTGAAAATGTGTATGCTGGTATTAGAGGCTTGGGAAATAAAGGAGTAGCTAGTAGTAACACTATGGAAGAAGCAAAATTTTCTAGTGCAAGGAAGCTGAAGAATCCACCAAATTACTCATCAGGGTTAATGTCAGCAATAGCTGAAATTGAGGACAAAGGAAATAGAGAAAACAATGAAGATATTGAAGGTTTTGCTGAAAGTCATAGTAATGATTTTATCTCAGGTTTCAATGGTGGTTCTTGGGATGATTCTCAAGTCATGACTAATAATGTTACTGGTCTAAAAAGACACAGAGATGATGAGTTGAAACCATTTGGTGGTTTAAATGCAACTGAGACTCAGAATGAAAGAGAAGGACAATCTTCTTTGGCTCATCAATTGAGTATGCCAAATACTTCATCTGAAATGGCAGCAATTGAGAAGTTCCTACAGTTCTCAGATTCTGTTCCATGCAAAATTCGTGCCAAACGAGGTTGTGCCACTCACCCAAGAAGCATTGCAGAAAGGGTTAGAAGAACTAAAATTAGTGAGAGAATGAGGAAATTACAAGATTTGGTCCCAAACATGGACAAGCAAACAAACACAGCAGACATGTTGGATTTGGCTGTTGATTACATCAAAGACCTTAAAAAGGAAGTTCAGAATATCAGTCTAAGTGTACGTGTTCACAGAAGCAGGAGCAATAACAGAAAAGATGGAGATATGGGTAACTTAGTCTCTGTACAGATTTGTAATAATAATTTGGTTACAAAGCTAGAATGTAAATAA 1293 0.3643 MESDPQKNNSSSGLTRYKSAPSSYFNNIIDKDFYEHIFNQPSSPETEQIFSRFMNSISGSGGGDVTPAALEEDSHPHNFSPVKEEIIINQEVNYEPVVWKEQQQHCDISSNYSSGVHGFYQSSARPPLPNQNLNSGMDGTYSFGVNRLQQMKTGSRNNLIRHSSSPAGLFSQINIENVYAGIRGLGNKGVASSNTMEEAKFSSARKLKNPPNYSSGLMSAIAEIEDKGNRENNEDIEGFAESHSNDFISGFNGGSWDDSQVMTNNVTGLKRHRDDELKPFGGLNATETQNEREGQSSLAHQLSMPNTSSEMAAIEKFLQFSDSVPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLKKEVQNISLSVRVHRSRSNNRKDGDMGNLVSVQICNNNLVTKLECK 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0385 430 MobiDBLite consensus disorder prediction 283 298 - -
Lal25g0385 430 Gene3D - 336 398 IPR036638 GO:0046983
Lal25g0385 430 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 337 399 IPR036638 GO:0046983
Lal25g0385 430 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 334 384 IPR011598 GO:0046983
Lal25g0385 430 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 7 392 - -
Lal25g0385 430 MobiDBLite consensus disorder prediction 274 298 - -
Lal25g0385 430 SMART finulus 340 390 IPR011598 GO:0046983
Lal25g0385 430 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 7 392 - -
Lal25g0385 430 Pfam Helix-loop-helix DNA-binding domain 339 384 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0385 Lal-Chr25 2593451 2596647 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0385 12 391 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G51140 38.601 1.47e-66 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lal25g0385 HLH 2.4e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0385 - - lang:109358074 496.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0385 25 2593451 2596647 Lal25g0385 25 2593451 2596647 ECH