Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0378 ATGGTCAATTGTACAACTATAGTTATAACTATAGTTATGAAAAGAGTTCTTGAATTTTACAAAGGTTTTGAGCACATTAATAAATTGGTAGATGTTGGTGGTGGTCTTGGGATAAATCTCAATCTCATTACTTCCAAATATCCTCATCTCCATGGTATTAATTTTGACTTGCCTCATGTCATAGAACATGCCCCTACTTATGCTGGCATGGAACACATGGGAGTAGATATGTTTGAGAGTGTTCCTCATGGAGATGCCATTTTTATGAAGGTGAGTTTTTCCTTTTGTAGGCATGAATTATTTTTCTATAATTTCTCAATATTAAATTCTCATTATTAG 339 0.3304 MVNCTTIVITIVMKRVLEFYKGFEHINKLVDVGGGLGINLNLITSKYPHLHGINFDLPHVIEHAPTYAGMEHMGVDMFESVPHGDAIFMKVSFSFCRHELFFYNFSILNSHY 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0378 112 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 9 99 IPR029063 -
Lal25g0378 112 Gene3D Vaccinia Virus protein VP39 1 99 IPR029063 -
Lal25g0378 112 Pfam O-methyltransferase domain 9 90 IPR001077 GO:0008171
Lal25g0378 112 PANTHER O-METHYLTRANSFERASE 1 91 IPR016461 GO:0008168
Lal25g0378 112 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 91 - -
Lal25g0378 112 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 112 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0378 Lal-Chr25 2528576 2529406 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0378 10 90 Monolignol Biosynthesis Gene Families AT5G54160 69.136 2.49e-35 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0378 K13066 - gmx:100789402 138.658