Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lal25g0376 | ATGGATTCTGATGATGATATGCACGACGCCAACGATGTGGACTCTCTCCATGAAGATTTCTACAGTGCTCAAGCTGAACATGCTCCCATTCATTACTACACTGACTACGATGATGATGATGATGATGATGACGATGACGATGATGACGATGATTACTTTGACGACGGTGATGATTCCGATAGTATTCAGTCTCGTTGCCCCGAGAGACTTCATCAATGTGCCGAAGGCCCATCAATAGAATTCAATGACTTCCGCACAAAACTAGCAGGATTGACCAGTGTGATTAGAAATTACTTTGAGATTTTGGTTAGGGCATTAGAAAATGGTTTATCTGACATGGATAGTAGTGGAGCTAATTCCAGCAAAGCTAAGAAAGGTGGAAGAGGAAAGGGAACCATTGGAGCTAGCATGTCTAGAAAAATGACTGATGATAATCTTTGTTCTTGTGAACATTGTACCTATGCAAATGTCCAATCAACAGTTTCTATGAAAATTTCAATCCTTCTTTAG | 510 | 0.4039 | MDSDDDMHDANDVDSLHEDFYSAQAEHAPIHYYTDYDDDDDDDDDDDDDDDYFDDGDDSDSIQSRCPERLHQCAEGPSIEFNDFRTKLAGLTSVIRNYFEILVRALENGLSDMDSSGANSSKAKKGGRGKGTIGASMSRKMTDDNLCSCEHCTYANVQSTVSMKISILL | 169 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lal25g0376 | 169 | MobiDBLite | consensus disorder prediction | 35 | 57 | - | - | |
| Lal25g0376 | 169 | MobiDBLite | consensus disorder prediction | 112 | 135 | - | - | |
| Lal25g0376 | 169 | MobiDBLite | consensus disorder prediction | 1 | 69 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lal25g0376 | Lal-Chr25 | 2509417 | 2521006 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lal25g0376 | 68 | 165 | ARIADNE family | AT1G65430 | 50.000 | 3.00e-23 | 93.6 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lal25g0376 | K11968 | - | gmx:100810427 | 116.701 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lal25g0376 | 25 | 2509417 | 2521006 | Lal10g1061 | 10 | 17628152 | 17636128 | LSH | |
| Lal25g0376 | 25 | 2509417 | 2521006 | Lal8g0315 | 8 | 2111474 | 2118469 | LSH | |
| Lal25g0376 | 25 | 2509417 | 2521006 | Lal1g0289 | 1 | 1713368 | 1719496 | PCT | |
| Lal25g0376 | 25 | 2509417 | 2521006 | Lal2g0183 | 2 | 1076480 | 1082755 | PCT | |
| Lal25g0376 | 25 | 2509417 | 2521006 | Lal9g0186 | 9 | 1154214 | 1160587 | PCT | |
| Lal1g0289 | 1 | 1713368 | 1719496 | Lal25g0376 | 25 | 2509417 | 2521006 | PCT | |
| Lal2g0183 | 2 | 1076480 | 1082755 | Lal25g0376 | 25 | 2509417 | 2521006 | PCT | |
| Lal9g0186 | 9 | 1154214 | 1160587 | Lal25g0376 | 25 | 2509417 | 2521006 | PCT |