LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal25g0374	ATGGTTGTGTACCTGCGGAAGAACCCATCATTCACTTTCGTTTTTCTATCTAATGTATCATATGGGATATGTTTAAATCTTGATGATCATTTTCCCTTAACCTGGTTTTGGAATTTGGAATTGGAGGGTAGGTGTATAGTTCTTTTGATGGATAGGAGGATGAACGATCATCAATCTGGACAGGGATTTGATTCAGATGATAGCGACCTTGATATGCAAGTAGAAATTAGCGAAAATCATGAGAAAGTAGACGTGTTTTCAGAAAACTTGGAATTATGTGCAGGTGAAGGTGAAAGGTATGTTGAACAACCTGTAGCAGATATTACAGCAGATGCAGAAGCTTTAGAACCACTTATAGACATGGAGTTCAATTCCAGAGAGGAAGCCAGGGAATTCTACATTGCTTATGGTAGGCGGGTAGGATTTACAGTTCGAATACACCATAACCGTCGTTCACGAGTAAATAATCAGGTTATTGGTCAAGATTTTGTCTGCTCGAAAGAAGGCTTTCGTGCAAAAAAGTATGTACACCGAAAAGATAGAGTGCTCCCTCCTCCACCAGCTACCCGAGAAGGTTGCCAGGCCATGATAAGACTGGCTTTACGAGATGGAGGGAAATGGGTTGTCACCAAATTTGTGAAGGAGCATAGTCATAAACTGATGAGTCCTAGTAAAGTTCCATGGCGAGGATTTGGGAAGAACTTGGTTAGTGAGTACATCAAATTTTTGTTGATGATTGTGTCACAGGATGAGAAAGATAGGAGAATACGTGAGCTATCGCATGAGTTGTACAATGAAAGGCAAAAGTTCAGACGACGTTGTGCTGCATATGAAGAACAACTAAATATGATTCTGAACGAGTTGGAAAAGTACACAGAACACATCTCGGAAAAGGTTGCTGATGTAGTCCGGAGTATAAGAGAGATAGACGAGGAAAAATCAGATTCAAATGGCGGGTCTAAGATCAGGGTCAGGTTCAAAGGCTGA	987	0.4093	MVVYLRKNPSFTFVFLSNVSYGICLNLDDHFPLTWFWNLELEGRCIVLLMDRRMNDHQSGQGFDSDDSDLDMQVEISENHEKVDVFSENLELCAGEGERYVEQPVADITADAEALEPLIDMEFNSREEAREFYIAYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYVHRKDRVLPPPPATREGCQAMIRLALRDGGKWVVTKFVKEHSHKLMSPSKVPWRGFGKNLVSEYIKFLLMIVSQDEKDRRIRELSHELYNERQKFRRRCAAYEEQLNMILNELEKYTEHISEKVADVVRSIREIDEEKSDSNGGSKIRVRFKG	328

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal25g0374	328	Pfam	FAR1 DNA-binding domain	131	221	IPR004330	-
	Lal25g0374	328	PANTHER	FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED	56	318	-	-
	Lal25g0374	328	PANTHER	FAR-RED IMPAIRED RESPONSE-LIKE PROTEIN	56	318	-	-
	Lal25g0374	328	Coils	Coil	260	294	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lal25g0374	Lal-Chr25	2500659	2506984	Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Lal25g0374		FAR1	2.1e-25	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lal25g0374	-		-	gmx:100810283	429.098