Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0370 ATGGGGTTCTCAGTTACACAATTATTAACATATGCTTTGAATTTGAACCAATGGGGTTTTGTATTTGAGCTTGTAGTTTTCTCTTATTTGTGGTCTCCAGTTTCAAGTCTTGGTTCCATGTCTTCAATGGCTACCTCTTATGGTGATCAAGGTTCTGTGGTTTGTGCTTTGAAATCAGATGGGTCTCATACTGTGAACTGCTATGGAAAAAACTCAGCAATAATTTATGGAACACAGCCATATTTGAAATTCTTTGGTCTAACTGCTGGTGATGGCTTTATATGTGGGCTTCTAATGAGTTCTAATCAACCCTATTGTTGGGGTAGCAGTAGCCATATTCAGATGGGTGTGCCTCAACCTATGATCAAAGGAGCTGAGTACCTAGAAATCAGTGCTGGTGATTACCATGTTTGTGGATTGAGGAAACCATTGAAGGGAAGAGAAAGGAACACTTCTTTTGTTGATTGTTGGGGCTATGAGATGACCAAGAACTATGTGTTTGATGGGCAGATTCAATCAATTTCATCTGGTTCCGAATTCAATTGCGGCTTGTTTTCTCAGAATAGGACTTTGTTTTGCTGGAGTGATGAGGCAGGTGGGAAAAGTATTATTAATCAGATTCCTAAAGACAATAATAGATTCCAAAAGATTGCTTGTGGTGGATTACATGTATGTGGGATCTTAGAAGGGGTGAATTCTAAAACTCTTTGTTGGGGAAGGAGCTTGAATATGGAGGAAGAGATTTCATTGGTACATTCAGGACAAGGACAAGGTGATATTGCTTTGGTTCCAAATGTTTCTATGCTTTCTGTAGTGGGAGGAAAGTTTCATGCTTGTGGTATTAAGAGCTATGATCATGGAGTTATATGTTGGGGCTCTAGTTTAAGAGGAAGTACTCTACCACCTAGTGAGATTAAGGTGTTTGAGCTTGCTGCTGGGAACTACTTCACCTGTGGAATAATTGCTGAGAATTCTCTTCAACCGGTTTGTTGGGGTACTAATTTCCCTACCTCTCTTCCAATTGCTGCCTCACCAAGAATGTGTAGGTCTACTCCATGTCCTCCAGATTACTATGAAATGGATCAGCAAAAGGGTCTTTGCAATTCACCAGATTCTCATCTTTGCATGCCTTGTAGCAGTCATTGTCCTTCTGAAATGTATCGAAAAAGTAAATGCACCATGACATCTGATTTAGTATGTGAATATAATTGCACTGCTTGTTCCTCACCTGCATGCTTCTCCAACTGCTCGGTTATTCCTGTTCCTGCTTCTGATTTGAAGAAGAAAAATGAAAGGATTTGGTCTCAGCAGTTGCCGATTATTGTTGCTGAGATAGCTTTTGTACTTTTCATAGTTTGTGTTGTATCTATATCGGCGGTTTTGTATGTTAGGTACAGGCTAAGAAATTGTAAGTGTTCAGCAACAACAAGGCCAAAGGAGAAGAGTTCTTCGCTTCAAAATGAGAACAGCAAGATAAGGCCAGACATGGAGGAGTTCAAGATTAGGAGAGCGCAGATGTTCACATATGAGGAACTTGAAAGTGCAACCGGTGGATTCAAAGAAGAATCCATAGTTGGGAAGGGAAGTTTCTCTTGTGTCTTCAAGGGAGTTTTGAAAGATGGCACTGTTGTTGCTGTTAAAAGGGCCATAATATCTCCCTCTCCCAACATGCCGAAAAACTCGAAAGAGTTTCACACCGAGCTTGATTTACTCTCAAGGTTGAACCATGCTCACTTGCTTAACCTACTAGGATATTGTGAAGAAGGTGGAGAAAGGCTTCTTGTTTATGAGTACATGGCTCATGGATCCTTGCATCAATACCTACATGGCCAAAACAAGGAGTTGAAAGAGCAACTGGATTGGATCAGGAGGGTAACAATTGCAGTCCAAGCAGCTCGCGGAATCGAATATTTGCATGGCTATGCATGTCCACCAGTGATTCATAGAGACATAAAATCTTCAAACATTCTCATTGATGAAGAACACAATGCAAGAGTTGCTGATTTTGGCTTATCATTGCTTGGTCCTGCAGATAGTAGCTCTCCACTTGCAGAACTACCAGCTGGTACTCTTGGTTACCTTGATCCTGAATACTATAGGCTTCATTATCTAACAACAAAATCCGATGTATACAGCTTCGGCGTTCTACTATTGGAAATCCTAAGTGGTAGAAAAGCCATTGACATGCAATATGAAGAAGGAAACATAGTTGAATGGGCAGTGCCTTTGATCAAATCAGGAGATATACCTGCAATCTTGGATCCAATTCTGAAACCTCCACCTGATATCGAAGCCTTGAAAAGGGTTGCAAATGTTGCTTGTAAAAGTGTGAGAATGAGAGGAAAAGATAGGCCTTCAATGGGAAAAGTAACAACAGCTTTGGAAAGAGCACTTGCACAGTTAATGGGTAGTCCTTGCATTGATCAACCAATTTTACCAACTGAGGTAGTTTTAGGAAGTAACAGACTTCACAAGAAACCATCTCAAAGGTCTTCAAACAGATCAGCTAATTCAGAAACCGATGTGCCGGAAACTGAGGATCATAGGTTTGAGTTTAGAGCACCCTCTTGGATAACTTTTCCAAGTGTTACTTCATCTCAAAGGAGAAAATCATCAGGCTCAGAAGCTGAAGTTGATGCTAAAAATCATGTTGAAGGGAGGAATTTTGGATCAAATGTTGGAGTTAGTGGTAATGCTGGTGATGTTTTGAGAAGCCTCGAGGAAGAGATAGGTCCTGCTTCTCCAAGAGAGAGGTTGTTCTTGCAGCACAATTTCTAA 2778 0.4071 MGFSVTQLLTYALNLNQWGFVFELVVFSYLWSPVSSLGSMSSMATSYGDQGSVVCALKSDGSHTVNCYGKNSAIIYGTQPYLKFFGLTAGDGFICGLLMSSNQPYCWGSSSHIQMGVPQPMIKGAEYLEISAGDYHVCGLRKPLKGRERNTSFVDCWGYEMTKNYVFDGQIQSISSGSEFNCGLFSQNRTLFCWSDEAGGKSIINQIPKDNNRFQKIACGGLHVCGILEGVNSKTLCWGRSLNMEEEISLVHSGQGQGDIALVPNVSMLSVVGGKFHACGIKSYDHGVICWGSSLRGSTLPPSEIKVFELAAGNYFTCGIIAENSLQPVCWGTNFPTSLPIAASPRMCRSTPCPPDYYEMDQQKGLCNSPDSHLCMPCSSHCPSEMYRKSKCTMTSDLVCEYNCTACSSPACFSNCSVIPVPASDLKKKNERIWSQQLPIIVAEIAFVLFIVCVVSISAVLYVRYRLRNCKCSATTRPKEKSSSLQNENSKIRPDMEEFKIRRAQMFTYEELESATGGFKEESIVGKGSFSCVFKGVLKDGTVVAVKRAIISPSPNMPKNSKEFHTELDLLSRLNHAHLLNLLGYCEEGGERLLVYEYMAHGSLHQYLHGQNKELKEQLDWIRRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVADFGLSLLGPADSSSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAIDMQYEEGNIVEWAVPLIKSGDIPAILDPILKPPPDIEALKRVANVACKSVRMRGKDRPSMGKVTTALERALAQLMGSPCIDQPILPTEVVLGSNRLHKKPSQRSSNRSANSETDVPETEDHRFEFRAPSWITFPSVTSSQRRKSSGSEAEVDAKNHVEGRNFGSNVGVSGNAGDVLRSLEEEIGPASPRERLFLQHNF 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0370 925 Gene3D Transferase(Phosphotransferase) domain 1 599 804 - -
Lal25g0370 925 Gene3D Phosphorylase Kinase; domain 1 489 598 - -
Lal25g0370 925 MobiDBLite consensus disorder prediction 863 898 - -
Lal25g0370 925 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 18 925 - -
Lal25g0370 925 ProSitePatterns Serine/Threonine protein kinases active-site signature. 646 658 IPR008271 GO:0004672|GO:0006468
Lal25g0370 925 ProSiteProfiles Protein kinase domain profile. 519 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal25g0370 925 MobiDBLite consensus disorder prediction 820 848 - -
Lal25g0370 925 SMART serkin_6 519 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal25g0370 925 SUPERFAMILY RCC1/BLIP-II 52 297 IPR009091 -
Lal25g0370 925 Pfam Protein tyrosine and serine/threonine kinase 522 727 IPR001245 GO:0004672|GO:0006468
Lal25g0370 925 SUPERFAMILY Protein kinase-like (PK-like) 498 794 IPR011009 -
Lal25g0370 925 MobiDBLite consensus disorder prediction 824 839 - -
Lal25g0370 925 PANTHER RECEPTOR-LIKE KINASE 18 925 - -
Lal25g0370 925 ProSitePatterns Protein kinases ATP-binding region signature. 525 547 IPR017441 GO:0005524
Lal25g0370 925 Gene3D - 83 351 IPR009091 -
Lal25g0370 925 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 102 143 IPR000408 -
Lal25g0370 925 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 352 400 IPR001368 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0370 Lal-Chr25 2492191 2494968 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0370 17 925 Receptor kinase-like Gene Family AT3G59420 65.721 0.0 1193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Lal25g0370 PK_Tyr_Ser-Thr 8.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0370 - - gmx:100797455 1429.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0370 25 2492191 2494968 Lal25g0370 25 2492191 2494968 ECH
Lal25g0370 25 2492191 2494968 Lal8g0310 8 2075659 2078394 LSH