Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0364 ATGGATAAGGACAAATCTTTGGGTCATGATGGAGGTTTCCTACCTTCAACAGGGCATTATTCGGGTTACTCACCCACCGGAAATGTGGCCTTTAATGTGAAATCTGAGCCAGCATCTTCATTATCGTCGTTTCATTCATCGGTTATTCCAGGTACCAGTGCAGATTGTAGTGGATTTAGTCATGATATTAGCAAAATGCCTGATAATCCACCAAGAAACAGAGGTCATAGACGTGCTCATTCGGAGATTCTCACATTACCTGATGATATTAGCTTTGACAGTGACCTTGGTGTAGTTGGAGGTGCTGATGGCCCCTCATTCTCTGATGACACTGAGGAAGACTTATTCTCAATGTACCTTGATATGGATAAGTTCAATTCATCGTCTGCTACATCAATGTTTCAAATCGGTGAGCTATCTAATGCTGCAGCTGCATCAGGTTCGGGGCCAATATCAGCACCTGCTTCAGGAGCACCAACCTCTTCTGCAGAGAACGTAGTTAGTGGTAACAATGAAAGGCCCAGAATTAGACACCAACATAGCCAATCCATGGATGGGTCAACAACCATTAAATCTGAGATGCTAGTATCGGGTTCTTCAGATGACATGTCTTCAATTGATACCAAAAAAGCAATGTCAGCTGCCAAGCTTGCAGAACTTGCCTTAATTGACCCCAAGCGTGCCAAAAGGATATGGGCAAATAGGCAGTCTGCAGCAAGATCAAAAGAGAGGAAGATGCGCTACATTGCTGAGCTTGAAAGAAAGGTTCAGACATTACAAACAGAAGCAACATCTATGTCTGCACAATTAACTCTCTTGCAGAGAGATACAAACGGGCTGAATTCTGAGAACAGTGAGCTGAAATTGCGGTTACAAACCACGGAGCAACAAGTTCGTTTGCAAGATGCATTAAACGATGCATTAAAAGAGGAAATTCAGCATTTGAAATTACTGACTGGGCAAGCTATGCCACCCAATGGAAGACCTATGATGAACTTTACTTCTTTCGGAGGGGGGCAACAATTCTATCCGAGTAACAATCATGGCATGCACACTCTTTTAGCTGCCCAACAGTTTCAACAGCTCCAAATTCATCCTCAGCAGCATCGGCGTCAGTTTCAGCAGCAGCAACAAATGCTTCAACAGCAGCAGCAGCAACAAATGCTTCAACAGCAGCAGCAGCAACAGGAACAGCAGCATCAACAATCAGGGGACTTGAAAATGAGAGCAGCTACACCACCTCCATCTTCCAAAGATAATATTTCATCAGATACAAATCCTTCAGAGACCAAGGATTGTTGA 1302 0.437 MDKDKSLGHDGGFLPSTGHYSGYSPTGNVAFNVKSEPASSLSSFHSSVIPGTSADCSGFSHDISKMPDNPPRNRGHRRAHSEILTLPDDISFDSDLGVVGGADGPSFSDDTEEDLFSMYLDMDKFNSSSATSMFQIGELSNAAAASGSGPISAPASGAPTSSAENVVSGNNERPRIRHQHSQSMDGSTTIKSEMLVSGSSDDMSSIDTKKAMSAAKLAELALIDPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSMSAQLTLLQRDTNGLNSENSELKLRLQTTEQQVRLQDALNDALKEEIQHLKLLTGQAMPPNGRPMMNFTSFGGGQQFYPSNNHGMHTLLAAQQFQQLQIHPQQHRRQFQQQQQMLQQQQQQQMLQQQQQQQEQQHQQSGDLKMRAATPPPSSKDNISSDTNPSETKDC 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0364 433 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 8 423 - -
Lal25g0364 433 Coils Coil 379 399 - -
Lal25g0364 433 MobiDBLite consensus disorder prediction 144 187 - -
Lal25g0364 433 SMART brlzneu 222 286 IPR004827 GO:0003700|GO:0006355
Lal25g0364 433 Coils Coil 242 269 - -
Lal25g0364 433 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 224 287 IPR004827 GO:0003700|GO:0006355
Lal25g0364 433 Coils Coil 277 311 - -
Lal25g0364 433 Pfam bZIP transcription factor 226 284 IPR004827 GO:0003700|GO:0006355
Lal25g0364 433 CDD bZIP_plant_RF2 227 276 IPR044759 GO:0003700|GO:0006355
Lal25g0364 433 MobiDBLite consensus disorder prediction 144 169 - -
Lal25g0364 433 SUPERFAMILY Leucine zipper domain 226 277 IPR046347 GO:0003700|GO:0006355
Lal25g0364 433 Gene3D - 225 278 - -
Lal25g0364 433 MobiDBLite consensus disorder prediction 389 433 - -
Lal25g0364 433 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 8 423 - -
Lal25g0364 433 MobiDBLite consensus disorder prediction 1 29 - -
Lal25g0364 433 MobiDBLite consensus disorder prediction 389 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0364 Lal-Chr25 2468748 2474710 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0364 20 356 bZIP Transcription Factor Family AT1G06070 69.822 1.12e-153 440
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal25g0364 bZIP_1 8.2e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0364 - - gmx:100786738 579.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0364 25 2468748 2474710 Lal10g1072 10 17696421 17700076 LSH
Lal25g0364 25 2468748 2474710 Lal8g0306 8 2052761 2055830 LSH
Lal25g0364 25 2468748 2474710 Lal1g0276 1 1621817 1625191 PCT
Lal25g0364 25 2468748 2474710 Lal9g0182 9 1135633 1140100 PCT
Lal1g0276 1 1621817 1625191 Lal25g0364 25 2468748 2474710 PCT
Lal9g0182 9 1135633 1140100 Lal25g0364 25 2468748 2474710 PCT