Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0363 ATGTTACGCTTTGTGTTCTTCAACTCCATCGAAATTTCTTCTCTCCGCAACATTCCCATCAATTTCCACTTCCCCTCATCGGGGAATATTCAGCCCAGCAAGACTTTGTGGATAGGATTCCCCCCTTCTTTTCGGATGGATGAACAAATGCTCCACAATGCATTAATACTGTTCGGGGAGATCAATAGAATTAGGAGTGTTCCATCACAAAATTGTTCGTTTGTTGAATTCAGAAGTATTGATGAAGCTCGGCGTGCCAAAGAGGGTCTTCAAGGACGGCTATTTAATGATCCTCAAATAATGATCAAGTATTCTAGCAGTGAGCTGGCACCTGGAAAAGATTACTCGGGCTTTTATCCTGGAAGTAAAGGGCCACGACCTGATGTGCTACTTAATGAGCATCCATTTCGACCACCACAGATGGATATGTTTGGCCATAATCGTCCTACTGTTCCAAATAATTTTCCTGAACAGCTGCCACCTGGTGGTAATATTGCACCAATTGCATCAATACGACCTTTCGGTCATCAAGGTCTTGAACCTCCTATCTCTGGACCTGGGTTTAATGAGATGGGCACAATCCACAATTTTCAGGATGGTAACTCCAAAAGTCAGATAGTTCCAAACTGGAAAAGACCATTCCCTCCTGCACCAGGAATGCTTTCTTCTCCGGTGCCAGGCACTAGGCCTCCTACTAGGTTCATCTCTGGTGCAAATGATGTACATGGCATAAACCAATTTCCGAGAGATTCTAAACGCTCAAGGATAGATGGTGCTTTGGTCATTCATGATGCTCCATTTCCTTTAAGGAATATTGATGGAGGTTTTATTGATCCAAAGAGTCACCATGGTCCAGTGGGCATATATGGCGTACCTGGTTCAGTCCAACCTGATATGGATCATATATGGCGTGGAATTATTGCAAAAGCAGGAAAACTTGTTTGTCATGCTAGATGTGTGCCTATCGGGACAGGGATAGGGACTGAGCTTCCTCATGTTGTTGATTGCACAGCTAGGACGACATTGGATATGCTCACGAAATACTATGCTGATGCAATTGGTTTTGGTACCATTTTCTTTCTCCCGGACAGTGAGGAGGATTTTGCTTCATACACTGAATTCCTTTGCTACCTCAAATCCCAAAACCGGGCTGGTGTTGCGAAGTGTATTGATAACACCACTTTATTCTTGGTACCTCCTTCTGATTTCCTAACCAAAGTTTTGAAAGTCACAGGACCTGAACGTCTATACGGCGTGATTCTTAACTTTCCAAGTATTGTGTCAATGCAACAAGCAACGCATTTGCCTGCACCCTCAACTCAGTACATGCAGCAGGTTCCTCCTTCGCAAACTGAGTATGGTTTTATCTCTGCAAATGGGCAGCAGGTTTTGACAATGGATTATAACAGAATGTCGCATGCGGATTCTAAGCTTCCTCCAAAACCATTTCATCCCACCACAACTGGCCCTCCTTCAGTTCATTCTGTTCCTCCTGATTATGCTCCTTCTCACACAGTTTCTACTTTGCAAGCTGGAGTTACATTGACACCGGAGCTTATTGCAACGTTAACATCCTTACTCCCTGCAGGTACACAATCATCTACAATTGATTGGGCAAAGACAGCAGCAGGCTCCTCGACTGTGCAACCACCATTTCCTCCAGTTGCACCTAATGATGGAAACCTATCTTATTTGTGGAAACAGGATCATCAAATTGGAAATCCATCTGGTCATCCTTCTCAACAGTTTGGGACTATGTATAATGTTCCCAGTGCTCAATATCAGCATTATCCATCAGCATATACTCCTGTGCACCCTGCTCAAGTGGTCCCTGGCAACTATAATTTCCAAGACACTGCTGCCAGCCTGCAGCAGCAAGGTACTGTTTCATCTGGACCAGTGAATAATTTCATTGTTCCTTCTCAAAGTGGACCGGTAGGTTTACCCCCTCATGTCAGTCAGCAGTATTCAGTTGAAGTCTCCTCCAGCACCCAGAATGGGTATGGAATGGTTCAGGGAGCAGATGCCTCTGTATTATATAGTGCTCAGGCTTTTCAGCAACCTTATAATCCAATTGCATCAGTTAATCAAGTTCCCGATGCTAATCCTTCACAACAACAAACCGTGCTGCCCTATACAGCAGACAACGTGAACTCAGAGCCTCCCAGTCAGCAACTACAATCTGCTAATTTTGAAGTTGGTCAGGGTACATCAGAAGTGGAGGCTGATAGGAACCAGAGATATCAGGCAGCGCTACAGTTTGCTTCCAGCCTCCTCCTCCAGATACAGCAAAAGCAAACTGATGGAGGGCATGGCCCAGAAAATCAACAGTGA 2334 0.4464 MLRFVFFNSIEISSLRNIPINFHFPSSGNIQPSKTLWIGFPPSFRMDEQMLHNALILFGEINRIRSVPSQNCSFVEFRSIDEARRAKEGLQGRLFNDPQIMIKYSSSELAPGKDYSGFYPGSKGPRPDVLLNEHPFRPPQMDMFGHNRPTVPNNFPEQLPPGGNIAPIASIRPFGHQGLEPPISGPGFNEMGTIHNFQDGNSKSQIVPNWKRPFPPAPGMLSSPVPGTRPPTRFISGANDVHGINQFPRDSKRSRIDGALVIHDAPFPLRNIDGGFIDPKSHHGPVGIYGVPGSVQPDMDHIWRGIIAKAGKLVCHARCVPIGTGIGTELPHVVDCTARTTLDMLTKYYADAIGFGTIFFLPDSEEDFASYTEFLCYLKSQNRAGVAKCIDNTTLFLVPPSDFLTKVLKVTGPERLYGVILNFPSIVSMQQATHLPAPSTQYMQQVPPSQTEYGFISANGQQVLTMDYNRMSHADSKLPPKPFHPTTTGPPSVHSVPPDYAPSHTVSTLQAGVTLTPELIATLTSLLPAGTQSSTIDWAKTAAGSSTVQPPFPPVAPNDGNLSYLWKQDHQIGNPSGHPSQQFGTMYNVPSAQYQHYPSAYTPVHPAQVVPGNYNFQDTAASLQQQGTVSSGPVNNFIVPSQSGPVGLPPHVSQQYSVEVSSSTQNGYGMVQGADASVLYSAQAFQQPYNPIASVNQVPDANPSQQQTVLPYTADNVNSEPPSQQLQSANFEVGQGTSEVEADRNQRYQAALQFASSLLLQIQQKQTDGGHGPENQQ 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0363 777 PANTHER FLOWERING TIME CONTROL PROTEIN FPA 28 777 - -
Lal25g0363 777 Pfam SPOC domain 297 414 IPR012921 -
Lal25g0363 777 PANTHER RNA RECOGNITION MOTIF-CONTAINING 28 777 - -
Lal25g0363 777 Gene3D - 25 112 IPR012677 -
Lal25g0363 777 SUPERFAMILY RNA-binding domain, RBD 25 107 IPR035979 GO:0003676
Lal25g0363 777 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 46 99 IPR000504 GO:0003723
Lal25g0363 777 MobiDBLite consensus disorder prediction 474 494 - -
Lal25g0363 777 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 34 107 IPR000504 GO:0003723
Lal25g0363 777 SMART rrm1_1 35 103 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0363 Lal-Chr25 2454865 2464800 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0363 - - lang:109351287 1380.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0363 25 2454865 2464800 Lal1g0274 1 1605278 1615617 PCT
Lal1g0274 1 1605278 1615617 Lal25g0363 25 2454865 2464800 PCT