Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0360 ATGCAGCCTAAGCAGATTAATGAGATCAAAGACTTCCTTCTCACTGCAAGGAGGAAGGATGCACGCTCAGTGAAAATCAAGCGAAGCAAAGATGTCGTCAAGTTCAAGGTCCGTTGCTCCAAGTACTTGTACACCCTGTCCGTGTTTGACTCTGACAAGGCCGATAAGTTGAAGCAATCACTTCCTCCTGGTTTGACTGTGCAAGATGTATGA 213 0.4601 MQPKQINEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLSVFDSDKADKLKQSLPPGLTVQDV 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0360 70 Gene3D - 2 70 IPR038464 -
Lal25g0360 70 Pfam Ribosomal L38e protein family 3 70 IPR002675 GO:0003735|GO:0005840|GO:0006412
Lal25g0360 70 PANTHER 60S RIBOSOMAL PROTEIN L38 3 70 IPR002675 GO:0003735|GO:0005840|GO:0006412
Lal25g0360 70 PANTHER 60S RIBOSOMAL PROTEIN L38 3 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0360 Lal-Chr25 2438130 2439380 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0360 3 70 Cytoplasmic Ribosomal Protein Gene Family AT3G59540 88.235 5.44e-40 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0360 K02923 - gmx:100500171 128.642
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0360 25 2438130 2439380 Lal8g0304 8 2040103 2042352 LSH