Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0345 ATGGAAGAAGAAATGAACTTGAATCATGAAATACCAGAGGCCGTAGATGAAATTGATGTTAGTGAAGATGAAAATATTAATGAAGTAGAAGAGTTTGATTTTGAAGAAATTGACTTTGGATCATTAAACGAAGATGAAGTAAAAAAATATAGAGAGGGATTTAGAGATAAGAAAAATGAATTAGTTCGAAAAAGGGCTCCAAGAAAAGAAACGAGATGTGGTTGTTTAGCAAGAATGAAAATTCACATTGACAAGGAGAAAGGTGATTGGTATGTTAGTTTTTTTGTTGATGATCATAATCATGAATTGGTTGGCGAACATTACGGTGGGATGATAGCGTCAAACCGAAGTATGACAGAAACAGACATCGCTTTGATGAACACAATGAGAGAAGTCGGAATTGGAACAGGCAAAATTTTTGGTTCATTCGCCGGTCAATCTGGTGGATATCGGTATATTGGATTCTCTAAGAAAGATATGTATAATCAAATTCAGAGACAAAGAATAATAGGAAATGGTGACGCAGAATCAGCATTACAATACCTGAAGGAACAATCAAAATCAGATTCTGCAATGTACTGGAGACATAGTGTAGATGAAGAAGGTAAGTTGCAACAATTATTTTGGGCGGATGGATGCAGCATTTTTGACTACTCAATTTTTGGAGATGTTCTAGCTTTTGATGCAACCTATGGTCGAAACAAGTACAAGTTTCCGGTGGTCATTTTTTCTGGTGTGAACCATCACAAGCAAACAACTGTATTTGCTGCTGGTATTGTGTCCAACGAGACAGAGGAAACGTATGTTTGGCTTTTGGGAAATTTCTTGGAGGCAATGAATGGGAAACATCCAAAGTGTGTTATCACTGATGGTGACTTGTCGATGAAAAATGCAATCAAAAGAATTTTCCCTGCAACTCATCATAGACTATGTGCTTGGCATATATGTAACAATGCTGGGAAAAATATAAAGAAGAATAACTTTCATAAGGACTTCCAGAAAGTTATGTATGCTGATGTTGAGATTGATGAATTTAATATGATGTGGGAGGAACTTATTGCTAAGCATGCACTTCATAATAATGCTTGGGCATCTCAGATATTTGATTGCAGAAGTATATGGGCTAGGTCATACATTCGAGGAAAGTTCTTTGCTGGTTTGCATACGACATCACGTTGTGAGGGATTACATTCACAAATGGGGAGATATGTAGAATATGGGTATAATGTTACTGAATTTTTACATCACTTTCAACGATGTCTAAGTTACATGAGGAACAATGAGGTCATGGAAGATTTTAAATCTTCGTATGGTGATGAATTGTTACAAACTCCTTATCATAGTTTAGAGGGTCATGCTGCTTCCATATATACTAGAGTTGTTTTCAAAGAATTCCGTGAAATTTTATTGGAAGCTGCAAAATTAAGGATAATTTCTTCCCAACAAACCTCAAGTCATGTCATATACAAGATTGGGAAGCATTATAATCCGAACAAGAAATGGCATGTATCACATTATGATAATGGTAGTAATGTGGACATCAAATGCTCGTGTAAACGAATGGAATCTTTTGGGATGCCATGCAGTCATAGTGTTTTTTTGTTACTAATTTTGGACATATCACAATTGCCATCTTGTTTGGTTCTGGAAAGGTGGACAAAGAAAGCAAAAAATGTTGAAGGTGTTAATTTTCAACAATGCGAGTTAAGCAGAGAATCGGTTAGAAGCAGTAGATACGGAGCTTTGAGTGATGCTTGTAGGGTGTTATGTAACCTTGCTTGCGAAAAGGAGGAAGACTTTTCAGAGATGCTGGAAAAAGTTTATAACGAATGTGGTAGACTCCGATCAAAACAACACTCTAGTTCGATGGAAAATGTTGACAATGCCAATGTAGATCAAGTAAGAGACCCAGTTCCAGTGTGTGCTAAAGGGAGAGTACCGGGGATTACCTCAAGGTCCAAGAGAGGTAATCAATGTGGTATATGTCGAGAAATTGGGCACAATAGGGCAAGTTGTCCAAATATTGTTGGTAGTTGTAGTCGTACTTTTGATAATGATTTCAATGAAGAATGA 2073 0.3666 MEEEMNLNHEIPEAVDEIDVSEDENINEVEEFDFEEIDFGSLNEDEVKKYREGFRDKKNELVRKRAPRKETRCGCLARMKIHIDKEKGDWYVSFFVDDHNHELVGEHYGGMIASNRSMTETDIALMNTMREVGIGTGKIFGSFAGQSGGYRYIGFSKKDMYNQIQRQRIIGNGDAESALQYLKEQSKSDSAMYWRHSVDEEGKLQQLFWADGCSIFDYSIFGDVLAFDATYGRNKYKFPVVIFSGVNHHKQTTVFAAGIVSNETEETYVWLLGNFLEAMNGKHPKCVITDGDLSMKNAIKRIFPATHHRLCAWHICNNAGKNIKKNNFHKDFQKVMYADVEIDEFNMMWEELIAKHALHNNAWASQIFDCRSIWARSYIRGKFFAGLHTTSRCEGLHSQMGRYVEYGYNVTEFLHHFQRCLSYMRNNEVMEDFKSSYGDELLQTPYHSLEGHAASIYTRVVFKEFREILLEAAKLRIISSQQTSSHVIYKIGKHYNPNKKWHVSHYDNGSNVDIKCSCKRMESFGMPCSHSVFLLLILDISQLPSCLVLERWTKKAKNVEGVNFQQCELSRESVRSSRYGALSDACRVLCNLACEKEEDFSEMLEKVYNECGRLRSKQHSSSMENVDNANVDQVRDPVPVCAKGRVPGITSRSKRGNQCGICREIGHNRASCPNIVGSCSRTFDNDFNEE 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0345 690 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 51 621 IPR031052 GO:0006355
Lal25g0345 690 Pfam MULE transposase domain 224 318 IPR018289 -
Lal25g0345 690 ProSiteProfiles Zinc finger SWIM-type profile. 501 539 IPR007527 GO:0008270
Lal25g0345 690 PANTHER OS02G0262500 PROTEIN 51 621 - -
Lal25g0345 690 Pfam FAR1 DNA-binding domain 50 104 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0345 Lal-Chr25 2356769 2359053 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lal25g0345 MULE 1.3e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0345 - - lang:109350553 634.024