Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0334 ATGGGTGCTTCAGGAAGGTGGTTTAAATCACTTCTCTCTCATAGAAAAACCTCAATTACTACTGATCAAGAGAAGGGTGGTGGTGATATTAGTAAGAGTAATAAGAAGTGGAAGCTATGGAGGACCTCTTCAGAAGGGTCTTCTTCAATGCCTATGAAAAAGGGTGGTGTTAATGGTGTATATGACAAACCTTATGAATCCTCTTCTTATAATGCTGCTATGGCTGCAGTGGTAAGAGCTCCACCAAAGGATTTTCAGATCATAAAGCAGGAATGGGCTGCAATTCGCATTCAAGCTGTGTTTAGATCCTTCTTGGCTAGAAGAGCTTTGAGGGCCTTGAGGGCAGTGGTAAGGCTGCAAGCTATATTTCGAGGCCGGCTAGTGAGGAAGCAAGCAGCTGTTACTCTAAGGTGCATGCAGGCTCTTGTTCGAGTTCAGGCACATGTCAGGGCAAGTAATGTGAGGAAATCTCCGGAAGAGAAAGCGGCGCAGAAATTATTGGATGAACATCACAACCAAGCTGATCCTATTATGGAGGTTGAGCAAAGATGGTGTGAAATTCCTGGAACTGTGGATGATGTTAAAGCAAAGCTAAGAATGAGGCATGAAGGAGCCATCAAGAGGGATAGAGCTATGGCATACTCTCTCTCCACACAGCAATCAAGAATGTGTGCTAGTCCAAACTCAAGAGCCTCAAGGACAGTGACTCCTCTCAAGCATCACAGCCTAGACAATAAGAGCTTAGGATGTAGCTTGTTAGAACGCTGGATGGCAACGAAGCCATGGGAGAGTCCAATCTCAAGGAGAAGCGAAGACCTTGTTCCTACTTTTCAATCAAGAATGAATGGCATGACAAAGAGGATTTCAGTTAAATCTCATACTCAATCGACTCCATCATCTTCGGCTATAAGCTCTGAATGCATGTATGATGATAGCCCTGCATCAACTTCATGCACATCTCGATCACCACCATCTCTGCCATCTACCAATATGGTGGAATCAACAGAAGAAAAAAATGTGCATAAGCTAAGCTACATGAATTTGACAGAATCAACTAAGGCTAAACTCAAAGGTTGCAGGTCTTCTTCGCAGAATTCGAAGAGGCTCGCAATGGAGGATTGTGTGTCTAATAGCTCAAAAACAACAACCTTTCTGAATGGAGATGCTAGAAGCAGTTCAGGCTCTGATCCTTCAGTTAATTTGTGGAAGGATCTTTCTGCAACACCTTTAAGGGCAAGTTATCAAAAACGATACGCTGGGAGATGA 1266 0.436 MGASGRWFKSLLSHRKTSITTDQEKGGGDISKSNKKWKLWRTSSEGSSSMPMKKGGVNGVYDKPYESSSYNAAMAAVVRAPPKDFQIIKQEWAAIRIQAVFRSFLARRALRALRAVVRLQAIFRGRLVRKQAAVTLRCMQALVRVQAHVRASNVRKSPEEKAAQKLLDEHHNQADPIMEVEQRWCEIPGTVDDVKAKLRMRHEGAIKRDRAMAYSLSTQQSRMCASPNSRASRTVTPLKHHSLDNKSLGCSLLERWMATKPWESPISRRSEDLVPTFQSRMNGMTKRISVKSHTQSTPSSSAISSECMYDDSPASTSCTSRSPPSLPSTNMVESTEEKNVHKLSYMNLTESTKAKLKGCRSSSQNSKRLAMEDCVSNSSKTTTFLNGDARSSSGSDPSVNLWKDLSATPLRASYQKRYAGR 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0334 421 MobiDBLite consensus disorder prediction 379 402 - -
Lal25g0334 421 MobiDBLite consensus disorder prediction 286 337 - -
Lal25g0334 421 ProSiteProfiles IQ motif profile. 90 118 IPR000048 GO:0005515
Lal25g0334 421 PANTHER IQ-DOMAIN 5-RELATED 1 419 - -
Lal25g0334 421 ProSiteProfiles IQ motif profile. 114 141 IPR000048 GO:0005515
Lal25g0334 421 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 419 - -
Lal25g0334 421 Gene3D - 87 138 - -
Lal25g0334 421 MobiDBLite consensus disorder prediction 379 406 - -
Lal25g0334 421 Pfam IQ calmodulin-binding motif 92 111 IPR000048 GO:0005515
Lal25g0334 421 Pfam IQ calmodulin-binding motif 114 131 IPR000048 GO:0005515
Lal25g0334 421 SMART iq_5 112 133 IPR000048 GO:0005515
Lal25g0334 421 SMART iq_5 89 111 IPR000048 GO:0005515
Lal25g0334 421 MobiDBLite consensus disorder prediction 286 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0334 Lal-Chr25 2281462 2285635 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0334 1 405 IQD Protein Family AT1G72670 45.221 2.18e-89 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0334 - - gmx:100788715 515.768