Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0332 ATGGCAACCAAACATGAAGAAGAATTAGCCAAAAGGGTGCAATACCCACTTGACCCTTCCTCCTACAAAATACTTGATGAGATTGGTGCTGGTGTGAGTGCCATTGTTTACAAAGCAATATGTGTGTCCATGAACTCATTAGTAGCCATAAAATCCATAGACCTTGATCGGTCACGCCCTGACTTCGATGATGTTCGACGTGAGGCCAAGACTTTGTCCCTTCTTTATCACCATAATATCCTCAATGCTCATTGTTGTTTCACTGTGGATCAGCGTCTATGGGTGGTGATGCCATTCATGGCTGGTGGGTCATTGCAATCCATCATTTCTCATTCTTTCTCTGATGGCTTAACTGAACCATGCATAGCTGTGGTTCTCAAAGAGACTCTTAATGCTCTTTCTTATCTTCATGGTCAAGGTCATCTTCACAGAGATATCAAGGCTGGTAACATACTAGTTGATTCAAATGGTTCAGTGAAGCTTGCAGATTTTGGTGTTTCTGCATCAATTTACGAGTACCCGAATTCGTCATCATCGACTGCAGCACCAAGTTTGTCATCCTCTTCATCTCTTAGGTTAACTGATGTTGCTGGCACACCATATTGGATGGCTCCAGAGGTGATTCATTCACACATAGGCTACAGTTTCAAGGCTGATATATGGTCTTTTGGTATAACAGCTTTAGAGTTAGCACATGGAAGGCCTCCACTCTCTCATCTTCCACCTTCTAAGTCTATGATACTTAAGATCACAAAGCGGTTTCGGTTTTCGGATCTTGACAAATATAGGAAAGGTCATGGTAGCAACAAGTTCTCAAAGGCCTTCAAGGACATGGTAGCTTCTTGCCTCCATCAAGACCCATCAAAGAGACCTACAGCTGAGAAATTGCTCAAGCATCCCTTCTTTAAGTACTGCAAGGGATCCGAATTTTTAGTGAAGAATGTGCTGCAAGGATTGCCTAGTGTTGAGAAAAGGTATAAAGAAAGCAAGATTCAGCCTACAACAACGCCGAATGATGATGACGACGACGAAGATGAAGGTGACATGATGAAGCAGCAATATGTGAAACAGAGAAGGATTAGTGGTTGGAACTTCAATGAAGATGGATTGGAACTTGAGCCTGTATTCCCATGTGATAACAAGTCAAGGGAGAAGGTTAAAGAAGTTCAGTTTGAGGGTGAAACTGTTATCCAAGACATGCAGCATGGTGAGTTAGAAGAGAATGTTGATATTTCATCACAAAACATGAGCAAACCAAACACAAATGCTACTTCTGATGTGACTATAGCTGAGAATTTAATGGTGACTTATAATCATGGATCATCAAGAGTAGTGGAAACAATTGGTGGTGATCAAGGTGGAGGTGTCTTGAAGAACAAGGAAGCTATGTTGACAACACTAAATGTGTTGAAAGGGAGTTTGGAACAAGAGCTAGGACAAGTTAAGGTTATGATGAATATCATAAAAGGAGAGGAGATTCAAGTTGTTGATAGACAAGATCATATGATACAAGAGATTTCTAAGCTGAGGATTGAATTGGATAATGAAAGGAAGAAGAATTCACTGTTGGAGTTGCAGCTTCAGACCAACCTTCAATCTGATTCAAAGTCTCAAACATCTAAACAAGTTTGTGATATATCTTCCTACTAA 1650 0.4073 MATKHEEELAKRVQYPLDPSSYKILDEIGAGVSAIVYKAICVSMNSLVAIKSIDLDRSRPDFDDVRREAKTLSLLYHHNILNAHCCFTVDQRLWVVMPFMAGGSLQSIISHSFSDGLTEPCIAVVLKETLNALSYLHGQGHLHRDIKAGNILVDSNGSVKLADFGVSASIYEYPNSSSSTAAPSLSSSSSLRLTDVAGTPYWMAPEVIHSHIGYSFKADIWSFGITALELAHGRPPLSHLPPSKSMILKITKRFRFSDLDKYRKGHGSNKFSKAFKDMVASCLHQDPSKRPTAEKLLKHPFFKYCKGSEFLVKNVLQGLPSVEKRYKESKIQPTTTPNDDDDDEDEGDMMKQQYVKQRRISGWNFNEDGLELEPVFPCDNKSREKVKEVQFEGETVIQDMQHGELEENVDISSQNMSKPNTNATSDVTIAENLMVTYNHGSSRVVETIGGDQGGGVLKNKEAMLTTLNVLKGSLEQELGQVKVMMNIIKGEEIQVVDRQDHMIQEISKLRIELDNERKKNSLLELQLQTNLQSDSKSQTSKQVCDISSY 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0332 549 Coils Coil 499 526 - -
Lal25g0332 549 Gene3D Phosphorylase Kinase; domain 1 10 99 - -
Lal25g0332 549 Gene3D Transferase(Phosphotransferase) domain 1 103 354 - -
Lal25g0332 549 ProSiteProfiles Protein kinase domain profile. 22 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal25g0332 549 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 3 535 - -
Lal25g0332 549 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
Lal25g0332 549 MobiDBLite consensus disorder prediction 327 347 - -
Lal25g0332 549 PANTHER SERINE/THREONINE-PROTEIN KINASE BLUS1 3 535 - -
Lal25g0332 549 SUPERFAMILY Protein kinase-like (PK-like) 20 303 IPR011009 -
Lal25g0332 549 SMART serkin_6 22 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal25g0332 549 Pfam Protein kinase domain 22 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0332 Lal-Chr25 2267396 2270344 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0332 12 520 MAP Kinase Kinase Kinase Kinase AT4G14480 53.307 1.16e-175 503
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Lal25g0332 Pkinase 1.4e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0332 K08835 - gmx:100820227 640.573