Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0321 ATGGACACCAATGTTGACCCACTTCAAAACCCTGCCAAAAGACACAAATGCTGTGCATGCTACAAGCAATATAAGAAAAAGGAGCATCTTATAGAGCACATGAAAGTCTCATACCACTCGATTCATCAGCCTAGATGTCCAATCTGTCTAAAGCACTGCAAGTTTCTTGAGTCTCTCAGAGAGCATCTTTTGGGTCCATCTTGTTCGGATATCTTCTCCGAACAAGGTTGTCAACTTTGCTTGAGAATATTTGGTAGCTCCGGGTCTCGCAATGAGCATATGGAATTTTGTCGGCTGCTTACTCCCATTCCCTTGGGAACTAGTGTGTCGCCCACAGTATCACACGAATTTGATTTTCAAGATTCCTATGATGAGAACCGTGTTGGCATGCGCCCTAAAGCAATTGCAATTGACTGTGAAATGGTTGGTGGAGGAAGTGATGGGTCGCTTGAACTCTGTGCTAGAGTATGCTTAGTAGATGAAGACGAAAAATTAATCTTCCACACCTATGTACAGCCTCAAATGCCTGTTACTAATTATAGATATGAGATAACTGGGCTGGCAGAAGAGCATCTTAGAGATGCCATGCCTCTCGAGCAAGTTCAACAAAAGATATTGCAAATTCTACACAATGGAGAATCCATTGGCGAAGTTAGATTGGAATCGTTGGATGGTGGAAAGGCCAGACTTCTTGTGGGGCATGGCTTAGCTCATGATTTAGATTGTTTGAAATTGAGTTATCCCGAACACTTATTGAGGGACACTTCATTGTATGGTCCATTGTTGAAAACAAACTCAGTCAGCCATTCACTCAATTATAATATTCAAACTAGCACTCATGACCCATATGAAGACTGTGTTTCTGTAATGAGACTTTACAAGAGAATACGAGGACAAGTTCATCAGGAGGAAGGCAATGGAACATCGATTTCAACCGCAAGTAACGACATTATTCTCGAGTCTGATCCGTGGGGGTCCAAGGAAGTTGACAATCTCACACCAGATGAACTATATGCCATGTCAAGTTCAGCTTTCAAGTGTTGGTGTTTGGATTTGAAGTCAAGATCAGCTTGA 1074 0.4218 MDTNVDPLQNPAKRHKCCACYKQYKKKEHLIEHMKVSYHSIHQPRCPICLKHCKFLESLREHLLGPSCSDIFSEQGCQLCLRIFGSSGSRNEHMEFCRLLTPIPLGTSVSPTVSHEFDFQDSYDENRVGMRPKAIAIDCEMVGGGSDGSLELCARVCLVDEDEKLIFHTYVQPQMPVTNYRYEITGLAEEHLRDAMPLEQVQQKILQILHNGESIGEVRLESLDGGKARLLVGHGLAHDLDCLKLSYPEHLLRDTSLYGPLLKTNSVSHSLNYNIQTSTHDPYEDCVSVMRLYKRIRGQVHQEEGNGTSISTASNDIILESDPWGSKEVDNLTPDELYAMSSSAFKCWCLDLKSRSA 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0321 357 PANTHER EXONUCLEASE FAMILY PROTEIN 12 355 - -
Lal25g0321 357 SMART exoiiiendus 133 302 IPR013520 -
Lal25g0321 357 SUPERFAMILY Ribonuclease H-like 134 296 IPR012337 -
Lal25g0321 357 ProSitePatterns Zinc finger C2H2 type domain signature. 17 39 IPR013087 -
Lal25g0321 357 Gene3D - 130 311 IPR036397 GO:0003676
Lal25g0321 357 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 12 355 - -
Lal25g0321 357 CDD REX4_like 135 294 IPR037431 GO:0006364|GO:0008408
Lal25g0321 357 Pfam Exonuclease 135 250 IPR013520 -
Lal25g0321 357 ProSiteProfiles Zinc finger C2H2 type domain profile. 15 44 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0321 Lal-Chr25 2198990 2203463 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0321 1 351 C2H2 Transcription Factor Family AT2G48100 47.709 5.51e-115 336