Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0301 ATGAAAACTCGAATTTTTGTGTACCAGAATGATTCAGTTCTTACTGTAGACAAAAAAGACTACATTAATTGTGATACAAGCAACCCCATCACTGTCTTTGACAATGGAAAGAGCATTCTGAATCTTGACATGTCTGGACCCTTCTACTTCATCAGTGGAACTGAAGATCACTGCACCAATGGACAAAAGTTACTTGTGGAAGTGATGTCACCACATCCAATTCCAAAATCTTCACCACCATTATCTCATGCTTCTGATGATACCTTAGAGGATTCAATCTCAGCCTCAGCCTCTGTAGTGCTTGGTCCAGTCCCTGTGGCTTCCATAGTCACATTTGTAATTATGCTTCTGTTAACAACCTCTGATGGTGTTTTTATGGTTACATTGGACAACTAG 396 0.399 MKTRIFVYQNDSVLTVDKKDYINCDTSNPITVFDNGKSILNLDMSGPFYFISGTEDHCTNGQKLLVEVMSPHPIPKSSPPLSHASDDTLEDSISASASVVLGPVPVASIVTFVIMLLLTTSDGVFMVTLDN 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0301 131 ProSiteProfiles Phytocyanin domain profile. 1 70 IPR003245 GO:0009055
Lal25g0301 131 PANTHER EARLY NODULIN-LIKE PROTEIN 2 5 113 - -
Lal25g0301 131 Gene3D - 2 69 IPR008972 -
Lal25g0301 131 SUPERFAMILY Cupredoxins 6 69 IPR008972 -
Lal25g0301 131 Pfam Plastocyanin-like domain 5 62 IPR003245 GO:0009055
Lal25g0301 131 PANTHER BLUE COPPER PROTEIN 5 113 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0301 Lal-Chr25 2062210 2062970 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0301 6 72 Phytocyanin Superfamily AT1G79800 58.209 1.55e-23 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0301 - - gmx:102664880 132.109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0301 25 2062210 2062970 Lal10g1121 10 18024868 18025729 LSH
Lal25g0301 25 2062210 2062970 Lal8g0257 8 1721013 1722092 LSH