Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0291 ATGATGGCTGGGAACCCTAACTGGTGGAGCATGCATCCAGCTTCTTTGATCCCTCCACAATATGTGCTTGGATCTTCTTCAAATCCTTTCAATTCTTTGGCTGAAAATCAAGAGCCTCCTCAATCATGGAGCCAACTGTTTTTCACTGGATTACCTGGGGAAGATGAAAGTATGGGTCTGAGTCATTTTCAATCTAAAAAGTTGGGAAACTGGGATGAACAAATTGATCTTGATCCATCTTCTAGAGTTCCTATTTTGGATATAATAAAGCAAGAGGTTTCCCAAAGTAGCAGTTTGTATGGGCATGAAGATTTTCATGCTGGTGGCTCATCTTGGTCAAATATGGTTCCAATTTCTTCCCCTAAGTCTTGTGTCACTAGTAGCTTCAGTAGTAATAGTATACTGGATCTCATCACTTATAACAAGGTAGATCAGAGAAAGATTAATCAACTTCCAGATCAAATATCTAAGTGTAATAGCACTGACACTGTTGGAGTTAGTAAGAAGGCTAGGGTTCATCAATCTTCAAGCCAACCACCTCTTAAGGTTAGGAAGGAGAAGTTAGGTGATAGAATAACAGCACTTCACCAACTAGTTTCCCCATGTGGAAAGACTGACACAGCTTCTGTGTTGTTAGAAGCCATTGGATATATCAGATTCCTGCAGGCTCAAATTCAGGCACTCACCTCTCCTTACTTGGACAATAATAATGCCTCAAAAAACATCAGGAATCAAGATTATGTACATGGAGAAACAAATTTGATATTTCCTGAGGACCCTGGTCAGGATAGAGAAGATAAAGCAAAGGAGTTGAAGAGTAGAGGGTTATGCTTGGTCCCTTTGTCTTGCACTCATCATGTTGAAAGTGAAAATGGGACTCATTATTGGTTACCCTAA 897 0.4002 MMAGNPNWWSMHPASLIPPQYVLGSSSNPFNSLAENQEPPQSWSQLFFTGLPGEDESMGLSHFQSKKLGNWDEQIDLDPSSRVPILDIIKQEVSQSSSLYGHEDFHAGGSSWSNMVPISSPKSCVTSSFSSNSILDLITYNKVDQRKINQLPDQISKCNSTDTVGVSKKARVHQSSSQPPLKVRKEKLGDRITALHQLVSPCGKTDTASVLLEAIGYIRFLQAQIQALTSPYLDNNNASKNIRNQDYVHGETNLIFPEDPGQDREDKAKELKSRGLCLVPLSCTHHVESENGTHYWLP 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0291 298 CDD bHLH_AtbHLH_like 182 228 IPR045239 -
Lal25g0291 298 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 182 232 IPR036638 GO:0046983
Lal25g0291 298 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 8 290 - -
Lal25g0291 298 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 8 290 - -
Lal25g0291 298 Gene3D - 182 246 IPR036638 GO:0046983
Lal25g0291 298 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 172 221 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0291 Lal-Chr25 2004667 2008958 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0291 1 264 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 35.057 5.03e-38 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0291 - - gmx:100802121 400.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0291 25 2004667 2008958 Lal25g0291 25 2004667 2008958 ECH