Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0286 ATGGGGAAGGGAACAGGTAGTTTCGGTAAGAGAAGGAACAAGACTCACACCTTATGTGTCAGATGCGGCCGCCGCAGCTTCCACCTCCAGAAGAGTCGCTGCTCCGCCTGCGCTTACCCCGCCGCTCGCAAGCGCACATATAACTGGAGTGTGAAAGCAATTCGTAGAAAAACCACTGGAACTGGTAGGATGAGGTACTTGCGCCACGTTCCTCGCCGTTTCAAGAGTGGTTTCAGAGAAGGTACTGAAGCTGCACCAAGGAAGAAAGGAGCTGCTGCCACTGCCTAA 288 0.5382 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPAARKRTYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRKKGAAATA 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0286 95 ProSitePatterns Ribosomal protein L37e signature. 4 23 IPR018267 GO:0003735|GO:0005840|GO:0006412
Lal25g0286 95 PANTHER 60S RIBOSOMAL PROTEIN L37 1 95 - -
Lal25g0286 95 SUPERFAMILY Zn-binding ribosomal proteins 1 55 IPR011332 GO:0006412
Lal25g0286 95 Pfam Ribosomal protein L37e 3 53 IPR001569 GO:0003735|GO:0005840|GO:0006412
Lal25g0286 95 Gene3D - 1 87 IPR011331 GO:0003735|GO:0005840|GO:0006412
Lal25g0286 95 PANTHER RIBOSOMAL PROTEIN L37 1 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0286 Lal-Chr25 1970683 1971763 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0286 1 95 Cytoplasmic Ribosomal Protein Gene Family AT1G52300 89.474 2.07e-59 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0286 K02922 - qsu:112017435 177.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0286 25 1970683 1971763 Lal25g0286 25 1970683 1971763 ECH