Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0281 ATGGATGACATTGAAGATGATGATACAAGGTATCCCTCTAACCCATATAGGGTTAGTCACCACCACCAAGGTTATGGTTATATGAGTCATCGGAAACTTCCGACAAATGTTTCTCCACATTCGCAGCCGGGTGAAAATGAATATGGGGAGAATAATAATATCAATGAGAGTGAGGAAGAGGAAGAGCAATTAGGAGAGGAAGAAGATGACGAGGAGGATGATGGTAACAATATTCACCCTTTGGAAAAGGATGCCGATGACAATGAAGATCGGGAGGAAGATGATGCTGATGCAAATGGGGGTGGTGATGAAAATTGTGATGGCGAGGATGATGATGACAATGATAAGCAGAAAAGTTATATCATGGAGATTGATGATGATTTAGAGCGCCAACCAAAAAAGCAAAAGCTGAAGAGTTTGATTTCAGCTTATGAATTTGCACCCCGTGTGCCAGCACCATCTGCTGCAGCTCCTTCAGCTCCTAAACCATCTTCTGGTGGTAGGAATCCCCTTACTGATTGGACTGAGCACGAGACATTCGTCCTTCTTGATGTATGGGGTGATCGGTTTCTTCAACATGGAAGGAAGAGTCTTCGATCCGAAGAATGGCAAGAAGTTGCAGAAAAGGTATCAAAAGTTTCAAGAGTTGACAGGACAGATAGTCAGTGTAGAAACCGTCTAGATACATTGAAGAAGAAATACAAAAAGGAGAAGATTAAATTTTCAGAAACGGATGGTGGAACTAGCAACTGGGTTTATTTTAAAAGGATGGACAAGCTAATGTGTTCTCCACCGCAACAAGCAGGTCTTTCTTGTGGTTTGGATGGGGAGTATGTTTCTATGAACTCTAGAATTTATTCAAATCGTGCAAATGGATTGGATGAAACGAGGGATAGTCCTGGGAATACAGAATCTACCGAAGAAGGTTCAGATGGGCCTCATGCAAAGAAAAGAAGAAAAGGAAGAGGTAGCTGTGAATCTTCTTCGTTCAGATTACTTGCTGATTCCCTTCATAAATTCAGTAACATATATGAGAAGATCGAAGACGATAGAAGACAGCAGATGGTGGAACTAGAAAAGATGAGGATGGATTTTCAAAAGGAAATAGAAACGGAGAGGCGGCAGATTTTAGAAAGATTGCAGAGCGAGATTTCAAAACTAGAACAGACAGATGATGAGAATGATGGTTCTTCTGAGAATGATGAAGATGTACATTGA 1218 0.4113 MDDIEDDDTRYPSNPYRVSHHHQGYGYMSHRKLPTNVSPHSQPGENEYGENNNINESEEEEEQLGEEEDDEEDDGNNIHPLEKDADDNEDREEDDADANGGGDENCDGEDDDDNDKQKSYIMEIDDDLERQPKKQKLKSLISAYEFAPRVPAPSAAAPSAPKPSSGGRNPLTDWTEHETFVLLDVWGDRFLQHGRKSLRSEEWQEVAEKVSKVSRVDRTDSQCRNRLDTLKKKYKKEKIKFSETDGGTSNWVYFKRMDKLMCSPPQQAGLSCGLDGEYVSMNSRIYSNRANGLDETRDSPGNTESTEEGSDGPHAKKRRKGRGSCESSSFRLLADSLHKFSNIYEKIEDDRRQQMVELEKMRMDFQKEIETERRQILERLQSEISKLEQTDDENDGSSENDEDVH 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0281 405 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 52 400 IPR044823 -
Lal25g0281 405 MobiDBLite consensus disorder prediction 34 51 - -
Lal25g0281 405 PANTHER OS01G0718900 PROTEIN 52 400 - -
Lal25g0281 405 MobiDBLite consensus disorder prediction 289 324 - -
Lal25g0281 405 Gene3D - 174 236 - -
Lal25g0281 405 ProSiteProfiles Myb-like domain profile. 174 231 IPR001005 -
Lal25g0281 405 MobiDBLite consensus disorder prediction 300 315 - -
Lal25g0281 405 Coils Coil 344 390 - -
Lal25g0281 405 MobiDBLite consensus disorder prediction 380 405 - -
Lal25g0281 405 MobiDBLite consensus disorder prediction 112 136 - -
Lal25g0281 405 MobiDBLite consensus disorder prediction 87 111 - -
Lal25g0281 405 Pfam Myb/SANT-like DNA-binding domain 173 260 IPR044822 -
Lal25g0281 405 Coils Coil 54 74 - -
Lal25g0281 405 MobiDBLite consensus disorder prediction 52 75 - -
Lal25g0281 405 MobiDBLite consensus disorder prediction 1 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0281 Lal-Chr25 1943929 1945540 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0281 330 401 Trihelix Transcription Factor Family AT3G14180 40.278 2.43e-10 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lal25g0281 Myb_DNA-bind_4 4e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0281 - - lang:109342851 454.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0281 25 1943929 1945540 Lal25g0281 25 1943929 1945540 ECH
Lal25g0281 25 1943929 1945540 Lal10g1140 10 18123871 18126305 LSH
Lal25g0281 25 1943929 1945540 Lal8g0236 8 1596239 1597420 LSH