Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0255 ATGGCACTAATTCTGCTTCATGGCAATCTCCATGCTACCATCTATGAAGTTGATAAGCTCAACACTGGCACTCACAATCTTTTCAACAAGGTAGTGGCAAACATTGAGGAGAAAGTTGGTTTTGGAAAAGGAGTTACTAAACTTTATGCAACCGTTGATCTAGAGAAGGCACGAGTAGGAAGAACAAGAATTATAGTAAAGGAGCATAAAAATCCTAGATGGTATGAGTCTTTTCACATTTATTGTGCCCATATGGCATCAAATATCATATTCACTGTGAAAGATGACAATCCTATTGGAGCAACCTTAATTGGAAGAGCATATGTTCCTGTTAAGGATGTCTTGAGTGGTGAGGAGATAGATAGATGGGTTGAGATATTGGATACTCAGAAGAGGCCAATACATGGAGGTTCAAAGATTCATGTGAGGCTGCAATTTTTCGATGTTACGAAAGATCGAAGCTGGGCTCTAGGCATTAGAAGTCCTAAATTTCCCGGTGTTCCTTATGCTTTTTTCTCACAACGAAACGGATGTAAAGTTTCTCTGTACCAAGATTCTCATGTTCCAGATAACTTTGTTCCTAAAATACCACTTAGCGGAGGCCGAAATTATGAGCCTCAGAGATGTTGGGAGGATGTTTTCGATGCAATAACTAATGCAAGGCACTTAATTTACATCACTGGATGGTCTGTTTATACTGAGATTTCATTGGTAAGGGATTCGAGGAGGTCTAAACCGGGAGGAGACATAACACTTGGTGAGCTTCTTAAGAAAAAAGCAAATGAAGGTGTCAGGGTTTTAATGCTTGTTTGGGATGATAGAACATCTGTTGGTTTGTTAAAAAAAGATGGGTTGATGGCTACTCATGATCAAGATACAGATAACTTCTTCTGCGGCACGCAAGTGAATTGTGTTCTATGCCCTCGCAATCCTGATGATAGTGGAAGCATTATTCAAGATATACAACGCGCTACCATGTTCACTCATCATCAGAAGATTGTGGTTGTAGATAGTAAGTTACCAAGTGGAGGGTCAGATAAGCGAAGAATTGTGAGTTTCGTTGGTGGCATTGATCTTTGTGATGGAAGATATGATACACAATTCCATTCACTTTTTCGAACGTTGGATACAGCACATCATGATGATTTTCATCAGCCTAACTTTGCTGGTGCTGCAATCACAAAAGGTGGTCCTAGGGAACCTTGGCATGACATACACTCGCGCCTCGAAGGGCCTATTGCTTGGGATGTTTTGTTCAACTTTGAGCAGAGATGGAGAAAGCAAGGTGGAAAGGATTTACTTGTTCCATTGACAGATCTTGCAGATGTCATTATTCCTCCATCACCGGTAACATTCAATGATGATCATGAAACATGGAATGTTCAGTTATTTAGATCAATTGATGGAGGAGCTGCTTTTGGATTCCCAGATACACCAGAAGATGCTGCTAAAATAGGTCTTATTAGTGGGAAGGATAGTATAATAGATCGTAGCATTCAAGATGCTTATATTAATGCTATTCGACGTGCGAAGAATTTCATCTATATCGAAAATCAGTATTTCCTTGGAAGCTGTTTTGATTGGGCTGCAGAGGGTATTAAGCCTGAAGACATTGGTGCTTTGCATCTTATCCCAAAGGAGCTTTCGCTAAAGATTGTTAGTAAGATTGAAGCCGGGGAAAGGTTCACTGTGTATGTCGTGGTTCCAATGTGGCCAGAGGGTTTTCCAGAAAGTGCATCAGTTCAAGCAATATTGGATTGGCAGAGAAGAACAATGGATATGATGTATAAGGATATTATTCAGGCACTCAAAGCCAGGGGAATTGTTGAAAATCCTAGGAACTATTTGACATTCTTCTGCCTTGGTAATAGGGAGGTCAAGAAACCAGGAGAGTATGAGCCTCCAGAAAAACCAGAGCCTAATTCAGATTATATGAAAGCACAAGAAAATCGGCGCTTCATGATTTATGTTCATGCCAAGATGATGATAGTGGATGATGAATACATAATCATTGGGTCTGCAAACATAAACCAAAGATCAATGGATGGTGCAAGAGACTCTGAGATAGCAATGGGAGCTTATCAACCCTATCATCTGGCGACCAATGAACCTGCAAGGGGTCAGATCCATGGTTTCCGCATGTCTCTATGGTATGAACACCTTGGCATGCTTCATGATTCCTTCCTCCACCCAGAAAGTGTAGAATGTATTAGTAAGGTGAATCAATTTGCTGATAAGTATTGGGACCTCTATTCTAATGAGTCACTAGACCATGACCTTCCTGGCCACTTGCTTCGCTATCCTATCGGAGTTTCCAGCGAAGGAAATGTCACGGAGTTGCCCGGATTTGAGTTCTTCCCCGACACCAAGGCTCGTGTTCTTGGTGCCAAAGCTGACTACCTGCCACCCATCCTTACTACTTAG 2424 0.4134 MALILLHGNLHATIYEVDKLNTGTHNLFNKVVANIEEKVGFGKGVTKLYATVDLEKARVGRTRIIVKEHKNPRWYESFHIYCAHMASNIIFTVKDDNPIGATLIGRAYVPVKDVLSGEEIDRWVEILDTQKRPIHGGSKIHVRLQFFDVTKDRSWALGIRSPKFPGVPYAFFSQRNGCKVSLYQDSHVPDNFVPKIPLSGGRNYEPQRCWEDVFDAITNARHLIYITGWSVYTEISLVRDSRRSKPGGDITLGELLKKKANEGVRVLMLVWDDRTSVGLLKKDGLMATHDQDTDNFFCGTQVNCVLCPRNPDDSGSIIQDIQRATMFTHHQKIVVVDSKLPSGGSDKRRIVSFVGGIDLCDGRYDTQFHSLFRTLDTAHHDDFHQPNFAGAAITKGGPREPWHDIHSRLEGPIAWDVLFNFEQRWRKQGGKDLLVPLTDLADVIIPPSPVTFNDDHETWNVQLFRSIDGGAAFGFPDTPEDAAKIGLISGKDSIIDRSIQDAYINAIRRAKNFIYIENQYFLGSCFDWAAEGIKPEDIGALHLIPKELSLKIVSKIEAGERFTVYVVVPMWPEGFPESASVQAILDWQRRTMDMMYKDIIQALKARGIVENPRNYLTFFCLGNREVKKPGEYEPPEKPEPNSDYMKAQENRRFMIYVHAKMMIVDDEYIIIGSANINQRSMDGARDSEIAMGAYQPYHLATNEPARGQIHGFRMSLWYEHLGMLHDSFLHPESVECISKVNQFADKYWDLYSNESLDHDLPGHLLRYPIGVSSEGNVTELPGFEFFPDTKARVLGAKADYLPPILTT 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0255 807 SMART C2_3c 9 123 IPR000008 -
Lal25g0255 807 Gene3D C2 domain 7 156 IPR035892 -
Lal25g0255 807 Pfam Phospholipase D C terminal 726 797 IPR024632 -
Lal25g0255 807 Pfam Phospholipase D Active site motif 325 363 IPR001736 GO:0003824
Lal25g0255 807 Pfam Phospholipase D Active site motif 654 680 IPR001736 GO:0003824
Lal25g0255 807 Gene3D Endonuclease Chain A 199 439 - -
Lal25g0255 807 SMART pld_4 325 363 IPR001736 GO:0003824
Lal25g0255 807 SMART pld_4 653 680 IPR001736 GO:0003824
Lal25g0255 807 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 653 680 IPR001736 GO:0003824
Lal25g0255 807 Pfam C2 domain 9 126 IPR000008 -
Lal25g0255 807 SUPERFAMILY Phospholipase D/nuclease 452 737 - -
Lal25g0255 807 PANTHER PHOSPHOLIPASE D 2 807 IPR015679 -
Lal25g0255 807 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 325 363 IPR001736 GO:0003824
Lal25g0255 807 PANTHER PHOSPHOLIPASE D ALPHA 1 2 807 - -
Lal25g0255 807 PIRSF PLD_plant 1 807 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Lal25g0255 807 CDD C2_plant_PLD 2 147 - -
Lal25g0255 807 ProSiteProfiles C2 domain profile. 1 124 IPR000008 -
Lal25g0255 807 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 149 IPR035892 -
Lal25g0255 807 SUPERFAMILY Phospholipase D/nuclease 150 443 - -
Lal25g0255 807 Gene3D Endonuclease Chain A 480 698 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0255 Lal-Chr25 1742980 1746842 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0255 1 807 Phospholipase D Gene Family (Wang group) AT3G15730 79.136 0.0 1384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0255 K01115 - gmx:100784434 1457.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g1246 17 13482662 13486936 Lal25g0255 25 1742980 1746842 ECH
Lal25g0255 25 1742980 1746842 Lal25g0255 25 1742980 1746842 ECH
Lal25g0255 25 1742980 1746842 Lal20g1210 20 16604689 16608969 PCT
Lal25g0255 25 1742980 1746842 Lal1g1258 1 13840645 13844888 PCT
Lal25g0255 25 1742980 1746842 Lal18g0208 18 1730179 1734569 PCT
Lal20g1210 20 16604689 16608969 Lal25g0255 25 1742980 1746842 PCT
Lal1g1258 1 13840645 13844888 Lal25g0255 25 1742980 1746842 PCT
Lal18g0208 18 1730179 1734569 Lal25g0255 25 1742980 1746842 PCT