Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0236 ATGGCAGAACCCAAGAAAGAAATGTTAAGGGAAAAAGGACAAGTGGGGAGACAAATAAAAGAAAAAACATCCAATGACATATCAGCTAGCAAAAGTTGTACATGGTTGTTCCTTGGAAGTTCCTATCAAACTGACACTCCACTATGCTCAAAACCATTATTGGATCTAAGTCTCTCTAGTAAAAGAGAATCATCAAATGAAAGCATAAAGCCAGAACTCAACCTTATCAACTGCTTTGATACAAATTCATCCATGAACTCCTCAGAATCTAGCCATGGTAATGAAATGGAGCCAAGGATTTTTGCATGCAACTACTGCCAAAGGAAATTCTATAGTTCACAGGCACTTGGTGGACACCAAAATGCACACAAACGTGAAAGAAGTTTTGCAAAAAGAGGACACAAAGCTGGTGCTGCAGTTTTAGTAGATTTTGGACACAGATTCTCAAGCATGGCTTCATTGCCTTTGCATGGCTCATATAATAGATCACTTGGAATTCAGGTGCATTCTATGATTAACAAACCTTCTTATCAAACACCCTTTTTTGGTTTGTCCCGTTCCAAAGGCCTAAATGGTTGGAAGAGGCACCATATGGATTTAAAACCAGCTATTGGAAATCTTCATGTTGTGGCAGAAACTGATTCATCTTTGGCTGGTGCTGGCATAACAAGGTTGGAGTTGTTTTCTCCTAGTACTGTTCCAGAGGGATATGGAGTTAACTTCTCAGTCTCCCTAAGGAAAAAAAAGAGGTTATCTTTGGTAGTTATTATATCTGACAGAGTAGTTATTGTCAACCTGGGACTGTTGGATCAAGATTGGTCCACCAAATGTTCACAAATTCAATGTTGTGATATGTCTTAG 861 0.3891 MAEPKKEMLREKGQVGRQIKEKTSNDISASKSCTWLFLGSSYQTDTPLCSKPLLDLSLSSKRESSNESIKPELNLINCFDTNSSMNSSESSHGNEMEPRIFACNYCQRKFYSSQALGGHQNAHKRERSFAKRGHKAGAAVLVDFGHRFSSMASLPLHGSYNRSLGIQVHSMINKPSYQTPFFGLSRSKGLNGWKRHHMDLKPAIGNLHVVAETDSSLAGAGITRLELFSPSTVPEGYGVNFSVSLRKKKRLSLVVIISDRVVIVNLGLLDQDWSTKCSQIQCCDMS 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0236 286 MobiDBLite consensus disorder prediction 1 19 - -
Lal25g0236 286 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 51 239 IPR044246 GO:0009788
Lal25g0236 286 ProSitePatterns Zinc finger C2H2 type domain signature. 103 123 IPR013087 -
Lal25g0236 286 SUPERFAMILY beta-beta-alpha zinc fingers 98 129 IPR036236 -
Lal25g0236 286 ProSiteProfiles Zinc finger C2H2 type domain profile. 101 128 IPR013087 -
Lal25g0236 286 Gene3D Classic Zinc Finger 80 141 - -
Lal25g0236 286 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 51 239 - -
Lal25g0236 286 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0236 Lal-Chr25 1631744 1634075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0236 55 228 C2H2 Transcription Factor Family AT1G80730 44.845 7.85e-36 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lal25g0236 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0236 - - gmx:102666245 230.72