Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lal25g0236 | ATGGCAGAACCCAAGAAAGAAATGTTAAGGGAAAAAGGACAAGTGGGGAGACAAATAAAAGAAAAAACATCCAATGACATATCAGCTAGCAAAAGTTGTACATGGTTGTTCCTTGGAAGTTCCTATCAAACTGACACTCCACTATGCTCAAAACCATTATTGGATCTAAGTCTCTCTAGTAAAAGAGAATCATCAAATGAAAGCATAAAGCCAGAACTCAACCTTATCAACTGCTTTGATACAAATTCATCCATGAACTCCTCAGAATCTAGCCATGGTAATGAAATGGAGCCAAGGATTTTTGCATGCAACTACTGCCAAAGGAAATTCTATAGTTCACAGGCACTTGGTGGACACCAAAATGCACACAAACGTGAAAGAAGTTTTGCAAAAAGAGGACACAAAGCTGGTGCTGCAGTTTTAGTAGATTTTGGACACAGATTCTCAAGCATGGCTTCATTGCCTTTGCATGGCTCATATAATAGATCACTTGGAATTCAGGTGCATTCTATGATTAACAAACCTTCTTATCAAACACCCTTTTTTGGTTTGTCCCGTTCCAAAGGCCTAAATGGTTGGAAGAGGCACCATATGGATTTAAAACCAGCTATTGGAAATCTTCATGTTGTGGCAGAAACTGATTCATCTTTGGCTGGTGCTGGCATAACAAGGTTGGAGTTGTTTTCTCCTAGTACTGTTCCAGAGGGATATGGAGTTAACTTCTCAGTCTCCCTAAGGAAAAAAAAGAGGTTATCTTTGGTAGTTATTATATCTGACAGAGTAGTTATTGTCAACCTGGGACTGTTGGATCAAGATTGGTCCACCAAATGTTCACAAATTCAATGTTGTGATATGTCTTAG | 861 | 0.3891 | MAEPKKEMLREKGQVGRQIKEKTSNDISASKSCTWLFLGSSYQTDTPLCSKPLLDLSLSSKRESSNESIKPELNLINCFDTNSSMNSSESSHGNEMEPRIFACNYCQRKFYSSQALGGHQNAHKRERSFAKRGHKAGAAVLVDFGHRFSSMASLPLHGSYNRSLGIQVHSMINKPSYQTPFFGLSRSKGLNGWKRHHMDLKPAIGNLHVVAETDSSLAGAGITRLELFSPSTVPEGYGVNFSVSLRKKKRLSLVVIISDRVVIVNLGLLDQDWSTKCSQIQCCDMS | 286 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lal25g0236 | 286 | MobiDBLite | consensus disorder prediction | 1 | 19 | - | - | |
Lal25g0236 | 286 | PANTHER | C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN | 51 | 239 | IPR044246 | GO:0009788 | |
Lal25g0236 | 286 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 103 | 123 | IPR013087 | - | |
Lal25g0236 | 286 | SUPERFAMILY | beta-beta-alpha zinc fingers | 98 | 129 | IPR036236 | - | |
Lal25g0236 | 286 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 101 | 128 | IPR013087 | - | |
Lal25g0236 | 286 | Gene3D | Classic Zinc Finger | 80 | 141 | - | - | |
Lal25g0236 | 286 | PANTHER | TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED | 51 | 239 | - | - | |
Lal25g0236 | 286 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lal25g0236 | Lal-Chr25 | 1631744 | 1634075 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lal25g0236 | 55 | 228 | C2H2 Transcription Factor Family | AT1G80730 | 44.845 | 7.85e-36 | 126 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Lal25g0236 | None | None | None |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lal25g0236 | - | - | gmx:102666245 | 230.72 |