Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0227 ATGGAGCCATGGCTCGATGATCTAACCGACGACCTTCAAAGCCTTAGCTTCGCCTCTTCCACCACCGCAGACATCAAACGTAGCACTAGCTTCAGCTCCGAAACCACCACCATCACCGCTTCCACCTCCGCTCACCTCGCTCCGACGCCGACCACCAAACACCACGCGCCGTCTTCCGACCCTCGCTGGTCTGCCATCCGCCGGATCCGGTCAGAGTCCCCCAGTCGCCGCATCCTCCCATCCGATATCCGCTTCAAACGGCGACTCGGCGCCGGAGACATAAGCTCGGTGTACTTAGCGGAAGTGAACGATGGTTCGGCGATGTTCGCGGCGAAGGTGATGGATAAGAAGGAATTAGCGAGTAGGAGCAAGGAAGGGAGGGCGAGGACAGAAAGGGAAATACTTGAATTGTTGGATCATCCTTTTCTTCCAACTCTTTATGCTACCATTGATGCGTCCAAATGGTTTTGCCTCCTCACTGAGTTTTGCCCCGGCGGCGACCTCCACGTCCTCCGTCAACGCCACCCTAACAAACGCTTCCTTGAACCCGCTGTCAGGTTCTATGCTTCAGAGGTGTTGGTAGCACTTGAATACCTTCACATGTTAGGTATAGTGTACCGTGACCTTAAACCTGAGAATGTGTTGGTTCGATCAGATGGTCACATCATGCTCACTGACTTTGATCTCTCCTTAAAATGTAATAATGATTCCACACCAATGGCTCAGATCAAACCTGATCAAAAGTCTCCTCACATCGCCCCACACCCTATTGAACCTTCTCATTTCACTTCATCAAAATGCATATTACCCAATTGTATAGTCCCAGCAGTTTCATGTTTCCACCCAAAACGCAAAAGAAAGAAGCAAAATCAACATAATGGTCCTGAGTTTGTCACTGAGCCCATTGATATCAGGTCCATGTCATTTGTTGGGACCCATGAATACTTGGCTCCTGAGATTGTGTCTGGTGAGGGACATGGTAGTGCTGTTGATTGGTGGACTTTAGGGATATTCATATTTGAATTGTTTTATGGTGTCACACCCTTTAGGGGCATGGACAATGAGTTAACCTTAGCAAATATTGTGGCTAGAGCCCTTGAGTTCCCTAAGGAACCCTTTGTACCTGCCACTGCTAAGGACCTTATCTCACAGTTATTGGTTAAGGACCCATCAAGGAGGTTAGGGTCAACAATGGGGGCTTCAACTATCAAGCACCATTCGTTTTTTCAAGGTGTGAGTTGGGCATTGCTAAGGTGTACAACTCCTCCATTTGTGCCTCCACCTTTTACTAAAGATAAAGAACCTGTATCTCATGAAAGTTGTTGTCCTGAGACTACAATTGATTATTATTGA 1353 0.4804 MEPWLDDLTDDLQSLSFASSTTADIKRSTSFSSETTTITASTSAHLAPTPTTKHHAPSSDPRWSAIRRIRSESPSRRILPSDIRFKRRLGAGDISSVYLAEVNDGSAMFAAKVMDKKELASRSKEGRARTEREILELLDHPFLPTLYATIDASKWFCLLTEFCPGGDLHVLRQRHPNKRFLEPAVRFYASEVLVALEYLHMLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCNNDSTPMAQIKPDQKSPHIAPHPIEPSHFTSSKCILPNCIVPAVSCFHPKRKRKKQNQHNGPEFVTEPIDIRSMSFVGTHEYLAPEIVSGEGHGSAVDWWTLGIFIFELFYGVTPFRGMDNELTLANIVARALEFPKEPFVPATAKDLISQLLVKDPSRRLGSTMGASTIKHHSFFQGVSWALLRCTTPPFVPPPFTKDKEPVSHESCCPETTIDYY 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0227 450 Pfam Protein kinase domain 306 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal25g0227 450 Pfam Protein kinase domain 85 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal25g0227 450 Gene3D Transferase(Phosphotransferase) domain 1 167 238 - -
Lal25g0227 450 Gene3D Transferase(Phosphotransferase) domain 1 305 427 - -
Lal25g0227 450 PANTHER FLIPPASE KINASE 1-RELATED 1 450 - -
Lal25g0227 450 MobiDBLite consensus disorder prediction 26 58 - -
Lal25g0227 450 SUPERFAMILY Protein kinase-like (PK-like) 63 439 IPR011009 -
Lal25g0227 450 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Lal25g0227 450 ProSiteProfiles Protein kinase domain profile. 83 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal25g0227 450 SMART serkin_6 83 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal25g0227 450 PANTHER OS11G0150700 PROTEIN 1 450 - -
Lal25g0227 450 Gene3D Phosphorylase Kinase; domain 1 82 166 - -
Lal25g0227 450 MobiDBLite consensus disorder prediction 26 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0227 Lal-Chr25 1546079 1549303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0227 1 450 AGC Kinase Gene Family AT3G44610 63.034 0.0 548
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lal25g0227 Pkinase 1.4e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0227 K08286 - gmx:100792738 712.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0227 25 1546079 1549303 Lal25g0227 25 1546079 1549303 ECH