Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0218 ATGGAGTTTTGGGGTACTGAGGTTAAGGTTGGTGAGACTGTTAAGGTAGACCCAGAAGAAATTGAGGCCTATGTTCATCTTTCTCAGGCTGCTCTTGGTGAGTCTAAGAAAGACAAAGCAAATGAACCTGTGATTCTTCACTTGAAAGTTGGTGAACAGAAACTTGTTTTGGGAACGCTTTCCCGGGATAAAATCCCTCAGGCATCTCTTGATGTTGTTCTTGACAAGGAGTTTGAGCTTTCCCACAGTTCAAAGAGTTCCAATTCTGATGAGGATATCCCATTGCCCGCCGCAGAAAATGGAAAACCTGTAATAAAAGCTGAAGAAGCAAAGGTTTCAGAACCTAAAAAGGCTGATGCTAAGGGTGATGTGCCAGCAAAACACGTTAAGATTGCTGATCCCAAGAAAGAAGAGGATGATGATGACGATTCTGATGATGATGATTCCGATGATTTCGGAAGTTCTGATGATGAGTTGGATGATGCTGACAGTGATAGCGATGATGAAGATGATAGTGAAGATGATGTAGAGACCCCTCCTAAGAAGGTGGAACTAGGAAAGAAAAGGGCCAATGATTCTGCATCGAAAACTCCAGTCTCTAACAAAAAGGCTAAAAATGCTACTCCTGAAAAGACTGATGGCAAGAAAGGTGGACATATAGCTACTCCTCACCCTGCAAAGAAGGGTGGAAAGTCTCCTAACAGTAATTTCAAGGGTCAGTCCCCGAAGTCTGGCGGACAATCCGGTGGACAATCCGGCCGTGGTGGCCTTTCAACTCTGGAGGTGGTCGTCAACAACATAACAAGGCTAAGCATGGCAAGTGATAATTTATGCCATTTAAATTTTGGTCGAAACGGATCCAATGCATCCGGCGTTAGAGTTGATACTCTTTTTGGTACTTCCAAGGGTATCATTCTTTTATAA 924 0.434 MEFWGTEVKVGETVKVDPEEIEAYVHLSQAALGESKKDKANEPVILHLKVGEQKLVLGTLSRDKIPQASLDVVLDKEFELSHSSKSSNSDEDIPLPAAENGKPVIKAEEAKVSEPKKADAKGDVPAKHVKIADPKKEEDDDDDSDDDDSDDFGSSDDELDDADSDSDDEDDSEDDVETPPKKVELGKKRANDSASKTPVSNKKAKNATPEKTDGKKGGHIATPHPAKKGGKSPNSNFKGQSPKSGGQSGGQSGRGGLSTLEVVVNNITRLSMASDNLCHLNFGRNGSNASGVRVDTLFGTSKGIILL 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0218 307 MobiDBLite consensus disorder prediction 104 137 - -
Lal25g0218 307 MobiDBLite consensus disorder prediction 138 175 - -
Lal25g0218 307 MobiDBLite consensus disorder prediction 206 220 - -
Lal25g0218 307 MobiDBLite consensus disorder prediction 176 191 - -
Lal25g0218 307 MobiDBLite consensus disorder prediction 233 257 - -
Lal25g0218 307 PANTHER HISTONE DEACETYLASE HDT3-LIKE ISOFORM X1 1 252 - -
Lal25g0218 307 PANTHER 32 KDA HEAT SHOCK PROTEIN-RELATED 1 252 - -
Lal25g0218 307 MobiDBLite consensus disorder prediction 78 257 - -
Lal25g0218 307 Pfam Nucleoplasmin-like domain 3 88 IPR041232 -
Lal25g0218 307 Gene3D Nucleoplasmin core domain 1 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0218 Lal-Chr25 1500949 1503697 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0218 1 83 C2H2 Transcription Factor Family AT3G44750 61.446 3.95e-25 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0218 - - lang:109351133 340.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0218 25 1500949 1503697 Lal25g0218 25 1500949 1503697 ECH
Lal25g0218 25 1500949 1503697 Lal10g1199 10 18423427 18426148 LSH
Lal25g0218 25 1500949 1503697 Lal8g0175 8 1185457 1186467 LSH
Lal25g0218 25 1500949 1503697 Lal2g0330 2 2004459 2007338 PCT
Lal2g0330 2 2004459 2007338 Lal25g0218 25 1500949 1503697 PCT