Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lal25g0210 | ATGACTATTGCTGGTGTGCACAGTGTGGCTGTGATTGACTCTACTTTCCTTAGGGACTCCCCTTCTCAGTCACCCGGGAGGCGAGGAGATGGAGAGAGAGGAAGCTCTCAGCCATCTTCGATCTTGCAAATATGGCGAGAGATTGAAGATGAGCGTGCGGGGAGTCAAGTTCAAGGAGGATCTGGAGAAACGTTGCTTCAAGAAAGAAGTGATGAGTTGGTTCCGGACCAATCTCAGGAAAATATGCCTGATATCCGTCAAAGAGAAGGGCATATGATAGGAGATGCAGATCTGGGGGAGAATGAATCTGAAATATATTCACAGTTACAAAGTCAGGGTGAGTCACATGATGAACAGGAGGAATTAAACAATCCTAGTTCTGAAAACTCTCATGATTTAGGAGAAGTTGAAAGGGAAAGAGTGAGGCAGATTTTCAGGGAGTGGAAGATTAGTGGTGATAGGGATCATGCATCAAATATTTACCGAGGAAATAGTGGCTCAAGGGGAGAATGGCTTGAGGAAGTTGAGCAGGAAAGGGTGAGTGTCACGAGGGACTTGGTACAAACAAGTGGCCAGCAGAGCGCTGTTTCTTCTGGGGATAATAAGGAAGAACGGTCTTCTGTAATTGGTACCCAAGTTGAAAGTGTACGTGATGGGTTTGTTGTTAATCAGAATGAGGGCCAACCTGAGCATACACGAAGGGGAATCCGCAAATTATGTGGCCGACAAGTTCTACTTGATATGCTTAAGAAGGCTGAGATGGAAAGACAGAGAGAAGTTCAGGAATTGTTGGACCATCGGGCCGTTTCTCATTTCCCCCATCGCAATCGCATCCAGGCATTGCTCAGAGGAAGGTTCTTGAGAAATGACAGATCAGTTGATAATAACAGGTCCTTTTCCATTGCGGAAAGTGAATTAGGCTTATTGAGGAAAAAACAGACTGTATCAGGTCTAAGGGAAGGATTCTTTTCTAGAAAAGACAATTCTGGTAGCAGTCAAGTAATGTGCAACCTATCTGATACCTCATCTGTCAGTGATATTGATGTAAATACCATTGAAAACACCGGAGCTAGCAGTTTGCATATGGTCCGAACTATACATTCTGAACAATCAGATGCTGATAACAGGGGAAGTGATGATAGAACTGGGATATCAGGTGGTCAAAATTGTTCACTAGGAATTGCTTGTGAAAATTTAGATTGGCAAGATTCTAATGCTAATGTAGAACCAAGAGATTGGGAATCATCATCTAGTATTGGGGTCACAAGAGGTGATAGCAGTGAACAAAATATTGATATGATGCCAACTGAAGGCACTGCTAATGATCCTGCCCAACAAAGCTTGCAAATGGAAGATACCGGGCATAGCAATATGCAGGAACTAACTGGTGTGCATGCTGAACAACCAGATGTGATTGATATAATGGATGATGAAAGCAATTTATCAAATCACAACATTCATGTAGAGGGCAATATTGTTGAATGGAGAAATAGCACTGAGGAAAGTGTAGATGGTAATCAGCTCAGTAGCACATCAAATGAATGGCCCCAAAACATTTTAGGAGATGGTGTAAATTCTCGTCTGCCAGAAGCTCCTGAACCTGAAATGTGGCAAGAAGATGGTGACTTTCAAGAGGCTGTGGAGATTTGGTTAGGAGCACCTTCCGATCACGAAATAGCTCAAGATGGTAGAATTCATGGATTTTATTTTCCAGATGACAACAATGTGTACAGTGTTGAACTCAGGGAACTGTTAAGTAGGAGAAGTGTCTCAAACCTCCTTCATAGCAGCTTTCGGGAAAGTCTTGACCAATTGATACAATCATATGTAGAAAGGCAAGGTCATGCTCATGTTCAGTGGGAGCTGCAAGATACAATCTCTCCTCCCTCGACAGAACAGGACCCGGAGCAGCAAAGCAGAAATCGGATTACTGGTCCTGCGGATGCTGTTAATAGTCCACTTGACCTACCCTTGCCGCCACCACCACCACCACCTCCTCGACCTCAATGGGATCGGCACTCACGTCACGACAACTGGTCACAGATTGACATAAATAATCAGCGCCTAGGAATTGAGTGGGATATTATTGGTGACATGAGAATGGACATGGTCAGGCTACAGCAAAGGATGAATAATATGCAGAGAATGATGGAGACCTGTATGGATATGCAGCTTGAGTTGCAACGCTCAATAAAGCAAGAAGTTTCTGCTGCTCTAAATCGCTCATCTAGTTCATCAGGAATACATGACCATGATTCACAAAATGGTCAATCTAACTGGGAATGTGTTAGAAAAGGAGTTTGCTGTATGTGCTGTGAAAGCAAGATTGATTCTTTGTTGTACAGATGTGGGCACATGTGCACATGTTCAAAATGTGCCAATGATTTGCTCAAAAGTAGAAGAAAATGTCCAATGTGTTATGCACCAGTAGTGGAAGTGATACGTGCTTATTCTATATAG | 2460 | 0.4321 | MTIAGVHSVAVIDSTFLRDSPSQSPGRRGDGERGSSQPSSILQIWREIEDERAGSQVQGGSGETLLQERSDELVPDQSQENMPDIRQREGHMIGDADLGENESEIYSQLQSQGESHDEQEELNNPSSENSHDLGEVERERVRQIFREWKISGDRDHASNIYRGNSGSRGEWLEEVEQERVSVTRDLVQTSGQQSAVSSGDNKEERSSVIGTQVESVRDGFVVNQNEGQPEHTRRGIRKLCGRQVLLDMLKKAEMERQREVQELLDHRAVSHFPHRNRIQALLRGRFLRNDRSVDNNRSFSIAESELGLLRKKQTVSGLREGFFSRKDNSGSSQVMCNLSDTSSVSDIDVNTIENTGASSLHMVRTIHSEQSDADNRGSDDRTGISGGQNCSLGIACENLDWQDSNANVEPRDWESSSSIGVTRGDSSEQNIDMMPTEGTANDPAQQSLQMEDTGHSNMQELTGVHAEQPDVIDIMDDESNLSNHNIHVEGNIVEWRNSTEESVDGNQLSSTSNEWPQNILGDGVNSRLPEAPEPEMWQEDGDFQEAVEIWLGAPSDHEIAQDGRIHGFYFPDDNNVYSVELRELLSRRSVSNLLHSSFRESLDQLIQSYVERQGHAHVQWELQDTISPPSTEQDPEQQSRNRITGPADAVNSPLDLPLPPPPPPPPRPQWDRHSRHDNWSQIDINNQRLGIEWDIIGDMRMDMVRLQQRMNNMQRMMETCMDMQLELQRSIKQEVSAALNRSSSSSGIHDHDSQNGQSNWECVRKGVCCMCCESKIDSLLYRCGHMCTCSKCANDLLKSRRKCPMCYAPVVEVIRAYSI | 819 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lal25g0210 | 819 | MobiDBLite | consensus disorder prediction | 114 | 136 | - | - | |
Lal25g0210 | 819 | MobiDBLite | consensus disorder prediction | 626 | 681 | - | - | |
Lal25g0210 | 819 | SUPERFAMILY | RING/U-box | 767 | 813 | - | - | |
Lal25g0210 | 819 | MobiDBLite | consensus disorder prediction | 29 | 43 | - | - | |
Lal25g0210 | 819 | MobiDBLite | consensus disorder prediction | 626 | 646 | - | - | |
Lal25g0210 | 819 | MobiDBLite | consensus disorder prediction | 653 | 668 | - | - | |
Lal25g0210 | 819 | CDD | mRING-HC-C3HC5_NEU1 | 768 | 806 | - | - | |
Lal25g0210 | 819 | Coils | Coil | 696 | 716 | - | - | |
Lal25g0210 | 819 | MobiDBLite | consensus disorder prediction | 408 | 428 | - | - | |
Lal25g0210 | 819 | Pfam | Zinc finger, C3HC4 type (RING finger) | 766 | 811 | - | - | |
Lal25g0210 | 819 | MobiDBLite | consensus disorder prediction | 187 | 208 | - | - | |
Lal25g0210 | 819 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 744 | 818 | IPR013083 | - | |
Lal25g0210 | 819 | PANTHER | PROTEIN, PUTATIVE-RELATED | 516 | 819 | - | - | |
Lal25g0210 | 819 | PANTHER | PROTEIN, PUTATIVE-RELATED | 1 | 449 | - | - | |
Lal25g0210 | 819 | MobiDBLite | consensus disorder prediction | 14 | 85 | - | - | |
Lal25g0210 | 819 | PANTHER | RING/U-BOX SUPERFAMILY PROTEIN | 1 | 449 | - | - | |
Lal25g0210 | 819 | PANTHER | RING/U-BOX SUPERFAMILY PROTEIN | 516 | 819 | - | - | |
Lal25g0210 | 819 | MobiDBLite | consensus disorder prediction | 105 | 136 | - | - | |
Lal25g0210 | 819 | ProSiteProfiles | Zinc finger RING-type profile. | 768 | 806 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lal25g0210 | Lal-Chr25 | 1433362 | 1438666 | Wgd |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lal25g0210 | - | - | lang:109350937 | 1457.97 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lal25g0210 | 25 | 1433362 | 1438666 | Lal25g0210 | 25 | 1433362 | 1438666 | ECH | |
Lal25g0210 | 25 | 1433362 | 1438666 | Lal2g0320 | 2 | 1923549 | 1928728 | PCT | |
Lal25g0210 | 25 | 1433362 | 1438666 | Lal9g0301 | 9 | 1928264 | 1934123 | PCT | |
Lal2g0320 | 2 | 1923549 | 1928728 | Lal25g0210 | 25 | 1433362 | 1438666 | PCT | |
Lal9g0301 | 9 | 1928264 | 1934123 | Lal25g0210 | 25 | 1433362 | 1438666 | PCT |