Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0194 ATGGATTCTTCTAATAATAAATTAAAAATCAAGAAATCTCATAGTAATAACAAGGATCGCCACATAAAAGTGAATGGACGAGATCGTCGTGTTTACTTGCCTAAACTATGTGCTTCTCGTATCACCCAACTCAGTAATGAGCTTGGACACAAGACTAATGGTGAAACTATTCAATGGCTATTACACCAAGCAGAACCTGCTATTATCATTGCCACTGGCACTGGCATTATACCTTCGAACAACGACAACAACAACAAAGCCTTTTCGGGTGTTGGTGTGAAGGATCCAATGGTCACAAACTTGGACAACAAGTTAAAGGGTATGAAGGTAGAAGAGAAAGCTTCTCCATCATTGCCATTGGATTTAGATATGACAATGCCTGATTTTCAATTTTCTGATAATGATATTGCATTAATCAAATCAGTTTTAGCCACTAATAGAGAGGATAAGAACTAA 456 0.3706 MDSSNNKLKIKKSHSNNKDRHIKVNGRDRRVYLPKLCASRITQLSNELGHKTNGETIQWLLHQAEPAIIIATGTGIIPSNNDNNNKAFSGVGVKDPMVTNLDNKLKGMKVEEKASPSLPLDLDMTMPDFQFSDNDIALIKSVLATNREDKN 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0194 151 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 8 88 IPR005333 GO:0003700
Lal25g0194 151 PANTHER TRANSCRIPTION FACTOR TCP16-RELATED 8 88 - -
Lal25g0194 151 Pfam TCP family transcription factor 16 88 IPR017887 -
Lal25g0194 151 MobiDBLite consensus disorder prediction 1 23 - -
Lal25g0194 151 ProSiteProfiles TCP domain profile. 17 71 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0194 Lal-Chr25 1308325 1308780 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0194 4 78 TCP Transcription Factor Family AT3G27010 62.667 2.89e-29 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lal25g0194 TCP 9.8e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0194 - - lang:109342241 112.079