Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0193 ATGTGTAAGACCAAAATGGCTACCAACGCTTCCTCACCTACTCCACGCACACGCTCTCAAACTTCAACACCACCCAACCGGCTACCGGCTACCGAACCCCCTACCTCTTCCTCCGAACCATCTACCTCATACTCTTATAACACCGGTTCCACCGGTTACCGGCTAACCTCTGACACCTCAATCTCAAGCCGTACCTCCCTCTCCTCTCTCCGCCACACTCTTCCTGAAAACCCTCACATCTATGATTTCTCTGAGATATCCTCCGCCACCAACAACTTCCTCTCCAAACGCCACTCTTCCTCCTCCGCCACGCCTTCCTGGCGCTGCACCCTCCGCGGCGCTGATGTTATTGTCTTCCAGCGTAAGTTCCGCCGAAAACTCCAAACCGATGAGCTACGACAACGCCTCTCTGTCATTTGCCGCAGCCACCACATCAGCATCATCAAGCTCCTTGGCGCTTCTATTTCTGGTGACCATATCTACCTTGTTTATGAGTTCGTTAACGGTGCTAACCTCGCTGATTGTCTTCGGAATACGAAGAACGTTAACTTTACTGTGCTTGGTACCTGGTTGTCGAGAATGCAGGTTGCAACCGATCTAGCTCACGCGCTTGATTATGTTCATAATAAAACAGGTTTGAATATTAATTTCGTTCATAACAATATCAAGAGCAGTGGAATCATCGTCACGGAGCCTTCGTTCAACGCTAGGGTTTGCCATTTCGGAGCTGCACAGCTCTGCGGCGACATTGAACCGGAAAACGAAACCGTCGCTCAGAAATTGGAGGAGATCGTGGAGGAAATATCGGATTTGCCACCGACGGCGAGATCTAAGGAATTGAGACGGTCGGAGAGTAGGAGATTGCAATTTCAAGGCGTCCGAGGGTACATGTCGCCGGAATTTCAAGCCACCGGCGTGGCGACACAGAAATCTGACGTTTACTCTTTCGGCGTGGTGATGCTGGAGCTGTTGACTGGTGAGGAGCCGTTGAAGTACAGATTTGATAAAAAGAGCGGTGATTTCGTAAAGACTTCAGTAATCGACACAGCGAGGTGCGCCGTAGACGGCAGCGGAGAAGGTAGCGTCGAGGGGAGGCTGAGAAAGTGGGTGGATCGGAGATTAAAAGATTCATTTCCTATCGAGGTAGCGGAGAAGGTGACGCGTGTCGCGTTGGATTGCGTACACGTGGATCCAGATAAGAGGCCCAACATGGGACGCGTGGCTGGTAAGATATCGAAGCTTTATTTGGAGTCAACGAATTGGTCTGAGAGTATTAAGATTCCGACTGGTATTTCTGTTTCATTGGCTGCTAGATGA 1317 0.5042 MCKTKMATNASSPTPRTRSQTSTPPNRLPATEPPTSSSEPSTSYSYNTGSTGYRLTSDTSISSRTSLSSLRHTLPENPHIYDFSEISSATNNFLSKRHSSSSATPSWRCTLRGADVIVFQRKFRRKLQTDELRQRLSVICRSHHISIIKLLGASISGDHIYLVYEFVNGANLADCLRNTKNVNFTVLGTWLSRMQVATDLAHALDYVHNKTGLNINFVHNNIKSSGIIVTEPSFNARVCHFGAAQLCGDIEPENETVAQKLEEIVEEISDLPPTARSKELRRSESRRLQFQGVRGYMSPEFQATGVATQKSDVYSFGVVMLELLTGEEPLKYRFDKKSGDFVKTSVIDTARCAVDGSGEGSVEGRLRKWVDRRLKDSFPIEVAEKVTRVALDCVHVDPDKRPNMGRVAGKISKLYLESTNWSESIKIPTGISVSLAAR 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0193 438 Pfam Protein tyrosine and serine/threonine kinase 124 408 IPR001245 GO:0004672|GO:0006468
Lal25g0193 438 Gene3D Phosphorylase Kinase; domain 1 54 166 - -
Lal25g0193 438 SUPERFAMILY Protein kinase-like (PK-like) 118 407 IPR011009 -
Lal25g0193 438 Gene3D Transferase(Phosphotransferase) domain 1 168 427 - -
Lal25g0193 438 MobiDBLite consensus disorder prediction 1 59 - -
Lal25g0193 438 ProSiteProfiles Protein kinase domain profile. 83 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal25g0193 438 PANTHER OS09G0572100 PROTEIN 1 437 - -
Lal25g0193 438 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0193 Lal-Chr25 1304973 1306289 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0193 76 425 Receptor kinase-like Gene Family AT1G51940 27.348 2.74e-37 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Lal25g0193 PK_Tyr_Ser-Thr 2e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0193 - - adu:107461746 594.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0193 25 1304973 1306289 Lal25g0193 25 1304973 1306289 ECH