Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0191 ATGAGAGGTTTACGGTTTACGTATGGGGGCCTGAGGTCACAATGTTCAGCTGAACAGATGGCAAATGGTACACATTCTAGTCACAAGGGTAAGGCTGAAGAAGTTAATAATAGGAGGCCAATGCAAGTTGGTGAGAAAGAAAAAGTAAATCCTCCTTCTAATGTGTTAGATGCAACTGGTCTCAGAAGGTCTACTAGGGAGGCATCATCAACGAAGTTGACTACAAGCCCTTCAACTACTCGGAAGTCTGAGCGGCTCGAAAACAAAACAACACCAACTCCTGCAGTTTGTAGGAAATCTCAAAAGGTTGAGAAGACAAATATGCCAAGTCCTTTGAGGAGATCTGGAAGACATAAGAATCACTCCGTTTCGACTCCTTCAGATTCTAAAAGTTCAGGGTCATCAAGTTCAAAGCAGAAGCCAAAAAAAGAGAAGACTGTGAAACAGTTGATATTTGAAGCTAAGGAAATCACTGAAAATGATGAACACGATGTGGGAACTCCCCAGGTTAAAGTAAAAAGAATGGATGCCCGTATGTACAGGGCTACCTTTATGAAACCAAAGAGAGATTGCCTCGAGAAGCCAAATACAACTGATAAGTCAACTCAGGAAGGTGGCACTAATGGTGGAGGCAAGATTGATGAGTGCTGCAAGTCGAGTGGGCATGTAAAAGGTCTGTTGGAAAATAATTCCACTCTAGGTTCATTGGTACCATCTAATGACACAACTCATGAGACTAGGTTGGCACCTCAAAGTGTTCAGCCTGATTGCAATGGAGAGGAGATATCACAGATGTTAGTTTCAATGAATGTGGTATCAGATGAAAATTTGGTTGGGAGCAATGTTGGGCTTGATAGTGGTGAAAAAATGATAGAGAGAAAAGGAACCACGGTGGACAAGGTTTCAAATGTTTATTCTACCATGTCTAATGATAACAACTGCACCTTGATTGGTGAGGCTGGCCCTTCAAGGCTAGGTGGCAATATTTTGGGGACTGACAGGCCATGTTCCAAACGAAGAAGGTTGGATGATGATTCTGCAGTCCCCCATTGTAATGAATCCTGTAACCCTTCTACAGTTGAGGAACCAGGCTGGCGAAGCTCTGTTAATAAATTAGCTCAGTTGCCTGGAAGAGTTTCTTCTAGATTTGGTAACAACAATCTTTTGGAGGCAGTGAACAAATTATGTGAGCATTGGCAGAAGGGCCAGAGCGCTATTGTAATTGATGACCACGAAAGAATTTTGAAAGTGGTTGCATTTATCGCAACGTTGCAGTCTGATATTTATCGTCCTTTCCTCATAATCTCAACCGCTGCTTGTCTCCATTCATGGGCGAATGAATTTGACCAGGTGGATCCATCTATAGATGTTGCAATTTACAATGGGGACAAAGAGATGCGTAACAGTATACAGAGATTTGAATTATATGATGAAGGAGGTTGTATACTCTTCCAGGTGCTCATAGTTGTTCCACATATCCTGATTGAGGATTTAGATGTTTTGAGAGGCTTTGAATGGGAAGCAATCATTGTGGATGAATGCCAATCCCCTAAAATCTCTTCTTATTTCAAGCAAATTAAGATGTTAAACACACATTTATCAGTTCTACTTTTCCGTGACCAGCTAAAGGATAGTATTGAAGAAAACATTAACATTCTGGCTCTCCTTGATTGTCAAAGTGGTAATGAAAAAGATGGTTCAACATCTAATTCCAGTAACAATATCGCTGACCTGAAGAAGAGGTTGTTAAGTCATATTGCATATAAATGCCAGACTGACTTCTTTAGGTTTGTTGAGTATTGGGTTCCTGTACAAATATCTCATGTGCAGCTTGAGCAGTATTGTGGTATTTTGCTTTCTAATGCTTCAATTCTTCGGTCTTCGTCAAAAGTTGATACTGCTGGAGCTCTTCGTGATGTCCTTAATTCAACCCAGAAGTGTTGTAATCATCCTTATGTTCTTAATCCATCCCTGCAACCTTTGCTTACTGAGGGTCTTCAAACAGCATCACCTGAGTTTCTAGATGTTGGTTGCAAAGCAAGTGGCAAGCTACAGCTTCTTGATTCAATGCTCAAGGAGTTGAGAAAAAAAAAATTACGAGCACTCGTTCTTTTTCAGTCTATTGGTGGTTCCGGTATTTTGGTCGACTTCCTGCTACTAAGATTTGGTCAAGATTCTTATGAAGGGATCGATAGATCTTCTCCTCTTAGCAAGAAGCAATCTGCCATGAAGAAATTTAACAACAAGGACAATGGATGCTTTATCTTTCTGTTAGAAACAATTGCTTGTCATTCAAGTATCAAATTGTCATCAGTTGATGCTGTTATTATATTTAATAGTGATTTGAACCCAATGAATGACGTAAGATCTCTTCAGAAGATAACACTTGATTCACAGTTTGAGTTCATAAAAATATTTCGTTTATATTCATCTTTCACTATTGAAGAAAAAGCCTTAATATTTGCGAAACAAGATAAGACCCTTGACATCAATATACAAAATATAAGCCCAAGTACCACTCATATGCTGTTGATGTGGGGTGCGTCTTGTCTATTTGATGATTTGAGAGTCTTTCATGATGGTGAAACTTCTGTCTCAAGTCTAGAATCCTTGTTTGGTGGAGAACCACATTTGAAAGCAGCCTGTGAGTTCTCATCCATACTATCTCAGGATGGTGAAAATAATGACACAAGCAACTGTTCATTTTTACTGAAAGTCCAGCCAAATGGGGGAAAATACCGTGGAAATTGTTCTTTGCTTGGTGAGCAGAAACTTAGGTTCCTGGATGAAGAAGCACCCCATATTTTTTGGACAAAACTTCTGGAGGGAAAACACTTTAAGTGGAAATACTCATGTGGTTTATCTCAGCGGAGCCGGAAGAAAGTTCATCATGTTAATGGTTCATTAGATAGGCCTGATCTTGTGAGTGAAAGCATCTCAAAGAAGCGCAGGAAAGTGAGCAACAATACTATTGATCAGCCTTCTTCAAAATCTGGTGGTCGGAAGTTATCTGCTGGGGCCAAGGCAGGAACGTCTAAAAATCCGCCTGGAGATCTGGCCGATGGGGATCCCGGTAATGGTGTTGAATCAGAGAAAAGTAGTAGACTGCATGATGAGCAGAGGAGTTTACATCTTTTGCTGAAGCCAGAGATTGTAAAGTTCTGCGAAGTTCTTCTTCTACCAGATAATGTCAAGAGTACTGTGAACAATTTTCTTGGATACGTTATCAACAATCATTGTGTCCCCAGGGAACCAGTGTCAATATCACAGGCTTTTCAAATATCCCTGGAATTGCGATCCGGTGATACACTGATTCAGGACCGAATCTGGACCAAAAATGATGCAGCCTCCAGGAGTGAAATTATATTGAATTTGATATTATCTTATGATATTGACTACCATAGTCTTGATAGCTCAGTGAACTGGGTCACAGTATTTCCTGCCGATTATAAATGCATTTTTTTTACAGGATTGCATTTAGTATGTAAAACTGATAAGGTTTTTCTTGTATTGTGCAAGTTTCAGATTTGGGCTGCTGCTTCTTTTGTAAAGCATAACCTTGACCAGAATGCTTCTCTTATTCTTGCGAAAGAAATTTTGAATTTTGACTGCAAGAAGGTAGAGGTGGAGTATCTATATTCGATGTTGCGGTGTCTAAAGAATATATTTTTATATCGCACAGGAATTTCTAGCGATACTGGTTCTCCAAAGGCTTCTGAATCACGTAATGGGGTGTATTCCTGTACGGGACGAGAAGTTGAATTGTTCAAAAAAGATATTTCCAAAAGTATTAAAGAAACTAAGAAGAAATTAAAGAAAAAGCTGACAAAGCTATTTTCTATGCAACTGGAAGAGAAGCAAAGATTGAAAGCAGCTATTGAGGATGAAAAGGCTCACTTTGAGAGTAAGTACAAGCTAGAGTCAGCAGCTATTCGATGTTGCTCTCCTAATGATGTGGTAAGAGAAGAAAAGCTTGAGGATTTGAGTAGGGAATATGCTAAAAAAATTGGAGAATTGAAATGTGAGCATGAAACACGTCTCAAGGATCTTGAGGACGTGCAATCAGCTAAAATACGAGACTTTCAAGATCAGGAGGCTGCTTGGGTGGAAGAGCTTATGTCTTGGGCAAAAAGTGAATTGTCAAACATAGATGCTTTAAAGGAACTTGGTAATGGGGTTGAATACTTGCAGACTTGTGATGAAGCACTGCCTCAAAAAGGTCTAAAGAATGTGGACCTTGTATCTGGTCATTTTACTGAAGGAATGGGTCATGATAATATGGTTGAAGTTATGACAGGAACCACGATTGGGGTTCCTGAAAGTAATTCCCCTACACTTGAATTATGCAGTGGACCAGTTGAACTGCAAACTCCTTTGGTCAACCATATCGGTGCTAATGGAATGAGCATTATAGGTTCAGAAGATCCACCAGTCTCTCAAAGTGAGGACCATAATATAGCTGAAAATGAGGTGATTTTTTACAGTAACACAAGTACTGCAGATGAAGGTTATGGGTGTGAAAATTTTAGCCGTGGATCCAGAGACCCTGTAGATGAAGATTTAGATAGAGAGTTGTCAAGACCAGGTGGACCTACCAGTCCAAGTAGTGGTCCACATGATATTACCCTTTCAAATTTACCTGTAGAGCACCAAAATCCCGATCGTGTCTCATCATGCGTACATGATGGACAATTTCCAGTTGAAGTGCCAGAAACTATTCATGAATGGCGCACAGTAAGTGTATTAGAAAGAGTGATACCTGCAGAAATGCTTAGGGTGGTCAATTTTACTGATTGTCCGGCAAATGCAACTCCTATGGATAATCCTTCTGAAAATCAAATATCTATAGGAGATTCGATAGATGTCCCAGTTTTAGATAATGTTTTGTCATCAAGACCTAGTGGAGCTGCTAGTCCAAGAGGTGGTACACTTACTGATCCAATTTTGAATCAACAACAAATTCTTGATGAATTCTCTTTTAATATACCCCATGAGGATATTCCAGTTATAGTGCCGGAAAATAGTCATGCTGTGGTTGATTGTCATAATAATGTGGAGCCTTTAACAAATGCTGGGTTGGTGCATACTACATCTGGGCAGCGGGAAGGGGTGCCTATAACGATGACAGAATGCACCTTGTCCCAGGATACTCCAGTATCTAGATCAGTTGATGCCGTGGAGCCTCTAGAACAAGTGCAGCAGCTATCATCTGCAGAATCCCCCCCTGACCAGGATATAGCAGGAGAAATGCAGAATTCTTCCAATCAAGTTGGGCTTGTTTCTAGTCCAGTTGATATTATACCAGCCAATCAATTCAATCATGCTTCACTGATCACGAGTCCTTCAGAGTCGGTGCAACAATTAACATCTTCCGAGCTCCCTTCTTCCAACCTAGATCCATCTAACATACATTTGTTACCTACAATTGAACACCAGCCCATCAATGAAGATGATGTCCCCTTCCATGATCCTGAGGCATCAACGATAGTTCCAAATCAAGATGCTGTGCAACCTGACTCAAATTTGGGACTGGATTCACATTCACATCAAGTTGTTATGCACCCTGCCGCAAATTCAAACCTGAGTTCAATTTCCCCTGGTGGGGCTGGAACACAGCCTTCAGACACACAAAATTTGTCAACTCCTTCGGGGATCAGTCATCATAATCATCTTATTCAAACTGCAACCCGTTCAGCTTCCGGATTTGTTCCGCCTTTGTGCTCTGAACCACTTAAATATGAATTGGAAAGAATACAACAAGTAACAGAGAAAATTAAGAAAAACCATGAAGATATGAAATTACAATTGAAATCTGATTTTGAAAAGGAATATGCGGAACTTCGCATGAAGTATAACATCAAATTTCAGGAGATTGAGGTTGAATTTCAGCAAACAAAGAAGAACCTAGATACAAGTCTCAATGCAGTTCTCATGAATAAGATATTGGCAGATGCTTTTAGGTCTAAATGCATGGTTCTTAAACAGCAAGATGCAGGTGCTGCACACCAATTGCCTCAACATTTAAGACAGCGTGGTGCTACACACCCCTCCATGGTTGCTGGTCCATCTTCTTGTCCACCTCCTGCACCCAGTCTGCATAATCCCTCCACTACGACGAGCCCTCAGAATGTGGTCGCGCCTATACAGCCTGCTTACAAGACATCTGGAGTTTTCTCCGGTGTTCCCCCAAGACCACCTCTTATCAACTCTGTCTCTTCACCTTTGGGAGGTTCAAGACCACCTCTTATCAACTCCGTCTCTTCACCATTGGGAGGTTCAAGACCACCTCTTATCAACTCCGTCTCTTCACCATTGGGAGGTCTCCAAGCTGGCGGTGAGATCCGGGCTCCCGCACCACATCTCCGGCCTTATAGTCCCTCCACATCTGTGCCAGCTACCACTCTCCCTGCTCCTCCTCGAGGGATTCCGCGTCAGCCAGCACCAAGTAACATTCCTGCAAGTTCTGCATTTTCTCACGGTCCACCCCGATCAAGACCGACAACCTATCAGTCTGATCATCATTTGGGACGTCGGCCTGATAATGCAGGTGGGTTACCCAGTGCCAACTTATCTCCTGTAGACCTCCCAAATGTTCGGCCACAGATGTCGCATGATACTTCTTTGAACCCATCTAGAGTTCGCACAATTAATTCGTCCCAAGAAGCTCCAGATTTTGTCTATTTATCAGATGACGACTAA 6699 0.413 MRGLRFTYGGLRSQCSAEQMANGTHSSHKGKAEEVNNRRPMQVGEKEKVNPPSNVLDATGLRRSTREASSTKLTTSPSTTRKSERLENKTTPTPAVCRKSQKVEKTNMPSPLRRSGRHKNHSVSTPSDSKSSGSSSSKQKPKKEKTVKQLIFEAKEITENDEHDVGTPQVKVKRMDARMYRATFMKPKRDCLEKPNTTDKSTQEGGTNGGGKIDECCKSSGHVKGLLENNSTLGSLVPSNDTTHETRLAPQSVQPDCNGEEISQMLVSMNVVSDENLVGSNVGLDSGEKMIERKGTTVDKVSNVYSTMSNDNNCTLIGEAGPSRLGGNILGTDRPCSKRRRLDDDSAVPHCNESCNPSTVEEPGWRSSVNKLAQLPGRVSSRFGNNNLLEAVNKLCEHWQKGQSAIVIDDHERILKVVAFIATLQSDIYRPFLIISTAACLHSWANEFDQVDPSIDVAIYNGDKEMRNSIQRFELYDEGGCILFQVLIVVPHILIEDLDVLRGFEWEAIIVDECQSPKISSYFKQIKMLNTHLSVLLFRDQLKDSIEENINILALLDCQSGNEKDGSTSNSSNNIADLKKRLLSHIAYKCQTDFFRFVEYWVPVQISHVQLEQYCGILLSNASILRSSSKVDTAGALRDVLNSTQKCCNHPYVLNPSLQPLLTEGLQTASPEFLDVGCKASGKLQLLDSMLKELRKKKLRALVLFQSIGGSGILVDFLLLRFGQDSYEGIDRSSPLSKKQSAMKKFNNKDNGCFIFLLETIACHSSIKLSSVDAVIIFNSDLNPMNDVRSLQKITLDSQFEFIKIFRLYSSFTIEEKALIFAKQDKTLDINIQNISPSTTHMLLMWGASCLFDDLRVFHDGETSVSSLESLFGGEPHLKAACEFSSILSQDGENNDTSNCSFLLKVQPNGGKYRGNCSLLGEQKLRFLDEEAPHIFWTKLLEGKHFKWKYSCGLSQRSRKKVHHVNGSLDRPDLVSESISKKRRKVSNNTIDQPSSKSGGRKLSAGAKAGTSKNPPGDLADGDPGNGVESEKSSRLHDEQRSLHLLLKPEIVKFCEVLLLPDNVKSTVNNFLGYVINNHCVPREPVSISQAFQISLELRSGDTLIQDRIWTKNDAASRSEIILNLILSYDIDYHSLDSSVNWVTVFPADYKCIFFTGLHLVCKTDKVFLVLCKFQIWAAASFVKHNLDQNASLILAKEILNFDCKKVEVEYLYSMLRCLKNIFLYRTGISSDTGSPKASESRNGVYSCTGREVELFKKDISKSIKETKKKLKKKLTKLFSMQLEEKQRLKAAIEDEKAHFESKYKLESAAIRCCSPNDVVREEKLEDLSREYAKKIGELKCEHETRLKDLEDVQSAKIRDFQDQEAAWVEELMSWAKSELSNIDALKELGNGVEYLQTCDEALPQKGLKNVDLVSGHFTEGMGHDNMVEVMTGTTIGVPESNSPTLELCSGPVELQTPLVNHIGANGMSIIGSEDPPVSQSEDHNIAENEVIFYSNTSTADEGYGCENFSRGSRDPVDEDLDRELSRPGGPTSPSSGPHDITLSNLPVEHQNPDRVSSCVHDGQFPVEVPETIHEWRTVSVLERVIPAEMLRVVNFTDCPANATPMDNPSENQISIGDSIDVPVLDNVLSSRPSGAASPRGGTLTDPILNQQQILDEFSFNIPHEDIPVIVPENSHAVVDCHNNVEPLTNAGLVHTTSGQREGVPITMTECTLSQDTPVSRSVDAVEPLEQVQQLSSAESPPDQDIAGEMQNSSNQVGLVSSPVDIIPANQFNHASLITSPSESVQQLTSSELPSSNLDPSNIHLLPTIEHQPINEDDVPFHDPEASTIVPNQDAVQPDSNLGLDSHSHQVVMHPAANSNLSSISPGGAGTQPSDTQNLSTPSGISHHNHLIQTATRSASGFVPPLCSEPLKYELERIQQVTEKIKKNHEDMKLQLKSDFEKEYAELRMKYNIKFQEIEVEFQQTKKNLDTSLNAVLMNKILADAFRSKCMVLKQQDAGAAHQLPQHLRQRGATHPSMVAGPSSCPPPAPSLHNPSTTTSPQNVVAPIQPAYKTSGVFSGVPPRPPLINSVSSPLGGSRPPLINSVSSPLGGSRPPLINSVSSPLGGLQAGGEIRAPAPHLRPYSPSTSVPATTLPAPPRGIPRQPAPSNIPASSAFSHGPPRSRPTTYQSDHHLGRRPDNAGGLPSANLSPVDLPNVRPQMSHDTSLNPSRVRTINSSQEAPDFVYLSDDD 2232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0191 2232 MobiDBLite consensus disorder prediction 2132 2146 - -
Lal25g0191 2232 MobiDBLite consensus disorder prediction 27 45 - -
Lal25g0191 2232 MobiDBLite consensus disorder prediction 1858 1886 - -
Lal25g0191 2232 Gene3D - 1907 1989 - -
Lal25g0191 2232 Pfam SNF2-related domain 415 653 IPR000330 GO:0005524|GO:0140658
Lal25g0191 2232 Gene3D - 597 829 IPR027417 -
Lal25g0191 2232 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 421 529 IPR027417 -
Lal25g0191 2232 MobiDBLite consensus disorder prediction 1512 1526 - -
Lal25g0191 2232 MobiDBLite consensus disorder prediction 961 1035 - -
Lal25g0191 2232 Gene3D - 389 596 IPR038718 -
Lal25g0191 2232 MobiDBLite consensus disorder prediction 2012 2043 - -
Lal25g0191 2232 MobiDBLite consensus disorder prediction 963 988 - -
Lal25g0191 2232 Coils Coil 1283 1303 - -
Lal25g0191 2232 MobiDBLite consensus disorder prediction 190 212 - -
Lal25g0191 2232 MobiDBLite consensus disorder prediction 2069 2232 - -
Lal25g0191 2232 MobiDBLite consensus disorder prediction 1504 1556 - -
Lal25g0191 2232 MobiDBLite consensus disorder prediction 17 146 - -
Lal25g0191 2232 Coils Coil 1915 1935 - -
Lal25g0191 2232 MobiDBLite consensus disorder prediction 57 81 - -
Lal25g0191 2232 MobiDBLite consensus disorder prediction 2194 2224 - -
Lal25g0191 2232 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 686 843 IPR001650 -
Lal25g0191 2232 MobiDBLite consensus disorder prediction 2071 2106 - -
Lal25g0191 2232 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 593 823 IPR027417 -
Lal25g0191 2232 MobiDBLite consensus disorder prediction 2148 2169 - -
Lal25g0191 2232 MobiDBLite consensus disorder prediction 1529 1552 - -
Lal25g0191 2232 PANTHER CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED 366 1102 - -
Lal25g0191 2232 PANTHER CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED 58 352 - -
Lal25g0191 2232 PANTHER CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED 1169 2215 - -
Lal25g0191 2232 PANTHER HELICASE PROTEIN MOM1-LIKE ISOFORM X1 58 352 - -
Lal25g0191 2232 PANTHER HELICASE PROTEIN MOM1-LIKE ISOFORM X1 366 1102 - -
Lal25g0191 2232 PANTHER HELICASE PROTEIN MOM1-LIKE ISOFORM X1 1169 2215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0191 Lal-Chr25 1272661 1287893 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Lal25g0191 SNF2_N 1.1e-06 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0191 - K11643 lang:109350993 1929.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0191 25 1272661 1287893 Lal25g0191 25 1272661 1287893 ECH
Lal25g0191 25 1272661 1287893 Lal1g0387 1 2362417 2373026 PCT
Lal25g0191 25 1272661 1287893 Lal9g0280 9 1752328 1769850 PCT
Lal1g0387 1 2362417 2373026 Lal25g0191 25 1272661 1287893 PCT
Lal9g0280 9 1752328 1769850 Lal25g0191 25 1272661 1287893 PCT