Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0189 ATGGCAGGTGAACCTTCTGATCATGGCCTAAACAAGTGGAAATGTAGATGTCATTCTTTCCTAGGAAATCAGAGACACTCTCTTGCAAATTGTTCTGAGTCGTGCGATTGCCATTCAGATGCCAAAGAGAGTGCATCCAAATGGACATGCATTTGTGATCCAAATGGGTTTCCTAAAGTGGCAGCTGATGGTCATAGTAATAATTGTTTTAAATCCTGCAACTGCACCTGGGGAACTATCAGAATGCCACTAGGTCCAAAGAAACACATTTCAAGCAAGATTGTAGTAGCCGTTCTATCGATATGTGTTGTATGCACAACTATTGCAATTGTTGCCTTTGCTGCATGCTATGTGAACCGAAAGGAAAGAAGTACTATTCATTCACCAATGATCTCATCAGATAAGGAAACAAGTTACAGTAGTTCCTTCAACTTAATTAGTGACAGGAATTCTTCAGTTCCAGAAACAAAAGTCACTATAAATTCTCCCATTAGTCATATTACAGGATGCTTTCAGAAGGTCTATTTCTTGTTTGGGAGACAAAAAGAAACTTTCCATGGAAATATTATTCAATTTTCATTTGCCGAACTAGAAAATGCCACTGAGAACTTTTCAGCTTCCAACCTAATTGGTCTAGGTGGAAGTAGTTATGTATACCGTGGTCGGTTGAAAGATGGTAGTAATGTGGCAGTTAAGAAACTAAAATATAAAGGGAGGCTTGAAGATGACTCTGAATTTTTCACAGAGATTGAACTATTGTCTAGGCTTCATCATTGTCATCTGGTGCCGTTGGTCGGATACTGCTCCGAATTAAAAGGAAAACAAGCTCAAAGGTTACTAGTATTTGAGCACATGACACATGGAAATTTGAGGGACCGTTTAGATGGAGTGTTTGGAAAAAATATGGATTGGTCGACGCGTGTTACAATTGCATTAGGAGCTGCAAGGGGCCTTGAATATCTTCATGAAGCAGCAGCTCCAAGAATTCTGCACAGAGATGTGAAATCAACAAACATTCTTCTAGGTGAAAATTGGCAAGCAAAAATAACTGATCTTGGTATGGCTAAGAACTTGAGAGGCGATGACATCGCCGGTTGTCCAGATTCTCCAGCAAGAATGCAAGGGACATTCGGTTATTTTGCACCCGAGTATGCAATTGTTGGGAGAGCCTCTCTCGAATCAGATGTTTTCAGCTTCGGGGTGGTTCTTCTTGAGCTTATCAGTGGCCGGCAACCCATCCATAAATCTGCAGGCAAAGAAGAAAGTCTTGTTATATGGGCTAGTCCGCGATTGCAGGATAGTAAGCGAGTAATAACTGAGTTGGCCGATCCACGATTGAAGGGAAACTTCCCCGAAGTAGAGGTACAGATGATGGCATACTTAGCAAAGGAGTGTTTGCTTTTGGACCCGGATACTCGGCCAGCAATGAGTGAGGTTGTTCAGATTCTTTCAAGTATTTCACCAGCCAAATCTAGGATGAGAAGGAGCATTTCAGTGAGCCTTTTTGAGGAACCAGAGGATGCAGAGAAGCAAAGACAAGCTCCATCAAATAGATTTTTGACTCGACATTTATCGACTCTAGAAAATAACCACAATCATTTTGCTGGAAAGGAAAATAAAGATGTAGGAAGAGTTTCAGTTGAGTATATTGATAGTTTGGTCCATTTGAGTTCAAAAGCTGAGAGCTGGCATGCATCAGAAGAAGAAATGGTAGACCTGACTGAGCCTCAGTTTGAATCATTTTGCATTTCAAATGTTGAGATTCCTTGA 1770 0.409 MAGEPSDHGLNKWKCRCHSFLGNQRHSLANCSESCDCHSDAKESASKWTCICDPNGFPKVAADGHSNNCFKSCNCTWGTIRMPLGPKKHISSKIVVAVLSICVVCTTIAIVAFAACYVNRKERSTIHSPMISSDKETSYSSSFNLISDRNSSVPETKVTINSPISHITGCFQKVYFLFGRQKETFHGNIIQFSFAELENATENFSASNLIGLGGSSYVYRGRLKDGSNVAVKKLKYKGRLEDDSEFFTEIELLSRLHHCHLVPLVGYCSELKGKQAQRLLVFEHMTHGNLRDRLDGVFGKNMDWSTRVTIALGAARGLEYLHEAAAPRILHRDVKSTNILLGENWQAKITDLGMAKNLRGDDIAGCPDSPARMQGTFGYFAPEYAIVGRASLESDVFSFGVVLLELISGRQPIHKSAGKEESLVIWASPRLQDSKRVITELADPRLKGNFPEVEVQMMAYLAKECLLLDPDTRPAMSEVVQILSSISPAKSRMRRSISVSLFEEPEDAEKQRQAPSNRFLTRHLSTLENNHNHFAGKENKDVGRVSVEYIDSLVHLSSKAESWHASEEEMVDLTEPQFESFCISNVEIP 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0189 589 ProSitePatterns Protein kinases ATP-binding region signature. 210 233 IPR017441 GO:0005524
Lal25g0189 589 ProSiteProfiles Protein kinase domain profile. 204 486 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal25g0189 589 Gene3D Phosphorylase Kinase; domain 1 178 284 - -
Lal25g0189 589 PANTHER RECEPTOR-LIKE SERINE/THREONINE-KINASE NCRK PROTEIN 9 583 - -
Lal25g0189 589 SUPERFAMILY Protein kinase-like (PK-like) 185 483 IPR011009 -
Lal25g0189 589 CDD STKc_IRAK 210 486 - -
Lal25g0189 589 PANTHER OS01G0253100 PROTEIN 9 583 IPR045271 GO:0004714|GO:0006468
Lal25g0189 589 Pfam Protein kinase domain 206 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal25g0189 589 ProSitePatterns Serine/Threonine protein kinases active-site signature. 329 341 IPR008271 GO:0004672|GO:0006468
Lal25g0189 589 SMART serkin_6 204 486 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal25g0189 589 Gene3D Transferase(Phosphotransferase) domain 1 285 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0189 Lal-Chr25 1255707 1260723 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0189 9 587 Receptor kinase-like Gene Family AT2G28250 51.027 0.0 545
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XVI Lal25g0189 Pkinase 1.4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0189 - - gmx:100499641 924.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0189 25 1255707 1260723 Lal25g0189 25 1255707 1260723 ECH
Lal25g0189 25 1255707 1260723 Lal2g0300 2 1758125 1767825 PCT
Lal2g0300 2 1758125 1767825 Lal25g0189 25 1255707 1260723 PCT