Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0183 ATGATGCCAATGCGATTGTTATGGAGATTAAGGTTGCCACTACTCATATTGATTCAACTTTTATACCCCAACAAATCAACCTACAAATTATATGCTGAGGCTTTGTTCACTATCAAAAGTTCACAACAATTTGGATGCAACATTGTGAATTATCCATGTCAAATACAATGGCCTTGTCTTGACTGCAATAAAATAAAAGATCCAGGTGGAATAACAGGAAAACTAGATGGGAATAATGACATTCCAACACTTACACCTCTTCAAGATTCTCAAGCTAAGAGACCAAAAGGAATAAGAGGTGCTGTCATAGTTGGTGGCATTGTTGCTTCCTTAATTGTGGTTGCAATTCTAGTGATTGTCTATATCTGCTTGATGAGAATTAAAAGACTTATAAGACAAACTTCTGAGACTGCTTCTTCTATGCCATCTCCATCAGTTGAGATGGGAAGAGGCAACAACTCAGAGTATGTAAATGCTTTTACTCCACAGAAGACAAGGCATATAACCATTTTGGAACTTCAACAAGCTACAAGAAATTTCAGTCCGAGTAATATTATAGGTGAAGGTGGATTTGGTTTTGTTTACAAGGGATTACTTGAAGATGGATCTATTGTAGCCATAAAAAGGCGCCAATTTGCTTTGACACCGGATTTCATCCGCGAGGTTAAGCAGATAACTCACACCCATCACATACATCTTGTCAAGCTTATAGGTTATTATGAAGATAGGTTCCAACAATTGCTTGTGTATGAATATCTCCCTAATGGCAATGTAGGGAATCACCTATATGACAATGAAGGTTTACCACTAGGAAGGTTAGACTTCTGGAGAAGGTTATCCATTGCTTTAGGAGCTGCCAAAGGACTTGAACATCTTCATAGTTTGGTCCCTCCTTTGGTTCACACAAATTTTAGAACTAGAAATGTTCTTTTAGATGAAAATTATACTGCCAAGGTTTCTGATTATGGATTCAGCAAAATGCTAAGAAAAGCTGACCAACCTGGCTCATCTTCAAACATAGACACCTTTCTTGATCCAGAGTTGAGCTTATCACAAAACTATTCAGAGCATAGTGATGTATATAGTTTTGGGGTCTTCTTACTAGAGTTGATAAGTGGATGTGAAGCACATAACAGAAACATGTCAAGCCCATATGAAACTCTAGTATTTCAGGCAAAACATAAGAATGATGTGGACAATTTTGTAGACATGACACTAGGAGAGCATGAAAAGCATAATGGTGCTACAAATATGATGAAGTTGGCATTGCTATGTGTGGATGTGAGTTATAGAAGACCATCAATGAGGCAAATTGTGCAAGAGTTGGAGTGTATTCAAAGAGAAATTGCTCCTTTCTATTCCCAATTCAGTGAGGAAATTGGTGTAGTTACTCTTGGGAGTGAGCTTTTTCAATAG 1416 0.375 MMPMRLLWRLRLPLLILIQLLYPNKSTYKLYAEALFTIKSSQQFGCNIVNYPCQIQWPCLDCNKIKDPGGITGKLDGNNDIPTLTPLQDSQAKRPKGIRGAVIVGGIVASLIVVAILVIVYICLMRIKRLIRQTSETASSMPSPSVEMGRGNNSEYVNAFTPQKTRHITILELQQATRNFSPSNIIGEGGFGFVYKGLLEDGSIVAIKRRQFALTPDFIREVKQITHTHHIHLVKLIGYYEDRFQQLLVYEYLPNGNVGNHLYDNEGLPLGRLDFWRRLSIALGAAKGLEHLHSLVPPLVHTNFRTRNVLLDENYTAKVSDYGFSKMLRKADQPGSSSNIDTFLDPELSLSQNYSEHSDVYSFGVFLLELISGCEAHNRNMSSPYETLVFQAKHKNDVDNFVDMTLGEHEKHNGATNMMKLALLCVDVSYRRPSMRQIVQELECIQREIAPFYSQFSEEIGVVTLGSELFQ 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0183 471 PANTHER PROTEIN KINASE APK1A, CHLOROPLASTIC-LIKE 71 469 - -
Lal25g0183 471 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 71 469 - -
Lal25g0183 471 Gene3D Transferase(Phosphotransferase) domain 1 253 459 - -
Lal25g0183 471 ProSitePatterns Protein kinases ATP-binding region signature. 186 208 IPR017441 GO:0005524
Lal25g0183 471 SUPERFAMILY Protein kinase-like (PK-like) 155 444 IPR011009 -
Lal25g0183 471 Pfam Protein tyrosine and serine/threonine kinase 184 442 IPR001245 GO:0004672|GO:0006468
Lal25g0183 471 Gene3D Phosphorylase Kinase; domain 1 143 252 - -
Lal25g0183 471 ProSiteProfiles Protein kinase domain profile. 180 453 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0183 Lal-Chr25 1182253 1186968 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0183 97 447 Receptor kinase-like Gene Family AT5G49780 36.639 4.29e-55 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Lal25g0183 PK_Tyr_Ser-Thr 4.5e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0183 - - gmx:100780443 682.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0183 25 1182253 1186968 Lal25g0183 25 1182253 1186968 ECH