Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0161 ATGAAACCATCATTTCCAAGAGACCCTCGTGGCTCTCTCGAAGTCTTCAATCCTTCTTCTTCTTTATCCCACTCCGATGAAACCACCACCTCGCCGGCGACTAAGCCGAAACCACTCTGGAAAACTTGGAAAGACACGGAGCCACCATGCAATACTTCCTCTGATGAAATCACCACCACTATCACCGCGGCAACCACCACCTCATGGATGGCACTCAAGGACCAACCTATTCTGGAAGGAGAATCCGGCAAGGCGGCGATGAGAGCCGCCGAATGGGGACTAGTACTGAAAACAGACACGGAGACAGGAAAGCCACAAGGAGTGACGGTTCGGAACTCCGGCGGAGATTCAAGAAGGCCTTCTAATAACTCCGGTAGGAACTCCGGCGAATCCTCCGACGGCGGAAATGAACCGCGGGGGATTCCGAAAGTGTCGGAGGAATTGAAGGAAGCACTGGCGGCGTTTCAACAAACATTCGTGGTTTCCGATGCAATGAAAGCAGATTATCCGATAATGTATGCAAGTGCTGGATTCTTTAACATGACTGGTTATACATCCAAGGAAGTCATAGGAAGGAACTGTCGATTTTTACAGGGTGCTGATACGGACCCAGAGGACGTGGCAAAGATAAGGGAAGCGTTGGAAGCAGGGACCAGTTACTGTGGAAGGTTACTAAATTATAAAAAAGATGGGACACCTTTTTGGAACCTTCTCACTATTTCTCCTATTAAGGATGACCATGGCAAAGTCCTCAAATTTATTGGAATGTTAGTGGAAGTTAGCAAGCATACAGAAGGGTCCAAGGAGAAGATGCTACGTCCCAATGGATTACCTGAATCCTTGATTAGATATGATGCTCGTCAGAAAGAGAAGGCTGCAACTTCAGTATCAGAGTTAGTTGAGGCCGTGAAGCGTCCCCGAGCGCTTAGTGAATCAGGAAACCTTCCCATGATCAGAAAATCAGGAGGAGATAAAGAAGAAAGAGGAGAAGAAGAAGAGAAAGCAGAGAATTTGTTAAGGAGAAACTCTGAGAGTGTAGCTTCTTTTAGAAGGAAATCATCACAAGGAGGAATTAGAAGTCCAATGCAGCGAATTAGTGAGCTACCTGATAAGAAACAGAAAAACTCTAATCGCCGCTCTTTTATCGGGTTTATTAGGAAGAGTGAGTCCAACGATGAAAACGTCATTGATGAGTTTGTTGAGGACGTGAGCTCGGAGAGTGAGGACGATGAGAGGCCTTATAGCTTTGATTTTGATGAAAAAGAAGTGCAAAGGGAAAAGAGAAAGGGTCTTGATCTTGCTACCACACTTGAACGTATTGAGAAAAACTTCGTCATTACTGATCCAAGGCTCCCAGATAATCCCATAATATTTGCATCTGATAGCTTCTTAGAGCTTACAGAATATAGTCGCGAAGAAATCTTGGGAAGAAATTGCAGGTTTCTGCAAGGATCTGAAACTGATCCTGAAACTGTAAGAAAAATTAGAGACGCAATTGACAAACAGACAGAAGTTACAGTGCAACTCATAAATTATACAAAAACTGGCAAAAAGTTTTGGAACTTGTTTCATTTGCAACCTATGCGTGATCAGAAGGGAGAAGTACAGTATTTTATTGGTGTTCAACTTGATGGTAGTCAACATGTGGAACCTCTTCAAAACAGCATCAAGGAAGATACTGCAAAGGAGGGAGAAAAATTGGTCAAAAAAACTGCAGAAAATGTTGATGAGGCAGTGAGAGAACTTCCGGACGCTAATATGAAACCAGATGATTTATGGATAAATCATTCAAAAGTGGTTCATGCCAAACCTCATAGGAGGGAAGAAGCTGCTTGGAAATCTATCAATAAGATCTTAGAGAGTGGAGAACAAATAGGCTTAAAGCATTTCAGGCCAGTGAAGCCTTTAGGGTCAGGAGATACTGGCAGTGTGCATCTAGTGGAGCTATCTGGAACTGGTGAATATTTTGCCATGAAGGCTATGGATAAGGGGGTTATGCTCAATCGTAACAAGGTGCATAGAGCTTGTACAGAGAGAGAAATCCTTGACATGTTAGATCACCCTTTTCTACCTGCATTATATGCTTCCTTTCAGACCAAAACCCATGTTTGTTTGATAACTGATTATTGTTCTGGTGGAGAACTCTTCATGGTTCTTGATCAACAGCCAAAAAAGGTTCTCAAGGAAGACGCTGTGAGATTTTATGCTGCCGAGGTTGTGATTGCATTGGAGTACCTTCATTGCCAAGGTATAATATATAGAGATTTGAAGCCAGAGAATGTTTTAATCCAGAGCAATGGACATGTGTCTCTAACAGATTTTGATTTGTCATGTTTAACATCTTGCAAGCCACAGCTTCTACTTCCTGCTATAGATGCAAAGAATAATAAGAAGAAGAAGAATAAGCAAAAAGGTCAAGAGCTTCCAATGTTTATGGCTGAACCAATGAGAGCGTCAAATTCTTTTGTTGGCACAGAAGAGTACATAGCTCCGGAAATTATAACTGGTTCAGGCCATACCAGTGCTGTTGATTGGTGGGCTCTTGGTATTCTTCTATATGAAATGCTCTATGGGTATACACCATTCAGGGGAAAGACAAGGCAAAAAACATTTGCAAATATTCTTCACAAGGATCTTAAATTTCCCAAAAGCAAACCGGCAAGTCTCCATGCAAAACAGTTAATTTACTGGTTATTGCATAGAGATCCCAAAAACAGATTGGGTTCAAAGGAAGGAGCAAATGAAATTAAGTCTCATCCATTTTTCAAGGGTCTCAATTGGGCACTAGTTCGTTGCATGAAACCTCCTGAGCTTGATGCTCCTCTCAAACTAGCAACTAAAGATGAAAGGGAAGCCAATGTAGACCCAAATCTACAGGATCTACTGACTAATGTTTTCTGA 2901 0.4236 MKPSFPRDPRGSLEVFNPSSSLSHSDETTTSPATKPKPLWKTWKDTEPPCNTSSDEITTTITAATTTSWMALKDQPILEGESGKAAMRAAEWGLVLKTDTETGKPQGVTVRNSGGDSRRPSNNSGRNSGESSDGGNEPRGIPKVSEELKEALAAFQQTFVVSDAMKADYPIMYASAGFFNMTGYTSKEVIGRNCRFLQGADTDPEDVAKIREALEAGTSYCGRLLNYKKDGTPFWNLLTISPIKDDHGKVLKFIGMLVEVSKHTEGSKEKMLRPNGLPESLIRYDARQKEKAATSVSELVEAVKRPRALSESGNLPMIRKSGGDKEERGEEEEKAENLLRRNSESVASFRRKSSQGGIRSPMQRISELPDKKQKNSNRRSFIGFIRKSESNDENVIDEFVEDVSSESEDDERPYSFDFDEKEVQREKRKGLDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGSETDPETVRKIRDAIDKQTEVTVQLINYTKTGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSQHVEPLQNSIKEDTAKEGEKLVKKTAENVDEAVRELPDANMKPDDLWINHSKVVHAKPHRREEAAWKSINKILESGEQIGLKHFRPVKPLGSGDTGSVHLVELSGTGEYFAMKAMDKGVMLNRNKVHRACTEREILDMLDHPFLPALYASFQTKTHVCLITDYCSGGELFMVLDQQPKKVLKEDAVRFYAAEVVIALEYLHCQGIIYRDLKPENVLIQSNGHVSLTDFDLSCLTSCKPQLLLPAIDAKNNKKKKNKQKGQELPMFMAEPMRASNSFVGTEEYIAPEIITGSGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPKSKPASLHAKQLIYWLLHRDPKNRLGSKEGANEIKSHPFFKGLNWALVRCMKPPELDAPLKLATKDEREANVDPNLQDLLTNVF 966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0161 966 MobiDBLite consensus disorder prediction 1 57 - -
Lal25g0161 966 MobiDBLite consensus disorder prediction 102 134 - -
Lal25g0161 966 SUPERFAMILY PYP-like sensor domain (PAS domain) 445 544 IPR035965 -
Lal25g0161 966 SMART pas_2 431 500 IPR000014 -
Lal25g0161 966 SMART pas_2 146 215 IPR000014 -
Lal25g0161 966 ProSitePatterns Protein kinases ATP-binding region signature. 636 659 IPR017441 GO:0005524
Lal25g0161 966 PANTHER PHOTOTROPIN-1 96 966 - -
Lal25g0161 966 Gene3D PAS domain 158 312 - -
Lal25g0161 966 Pfam Protein kinase domain 633 922 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal25g0161 966 SUPERFAMILY PYP-like sensor domain (PAS domain) 167 257 IPR035965 -
Lal25g0161 966 MobiDBLite consensus disorder prediction 320 340 - -
Lal25g0161 966 MobiDBLite consensus disorder prediction 97 141 - -
Lal25g0161 966 ProSiteProfiles PAS repeat profile. 429 506 IPR000014 -
Lal25g0161 966 TIGRFAM sensory_box: PAS domain S-box protein 454 544 IPR000014 -
Lal25g0161 966 TIGRFAM sensory_box: PAS domain S-box protein 170 265 IPR000014 -
Lal25g0161 966 SMART serkin_6 630 922 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal25g0161 966 MobiDBLite consensus disorder prediction 305 375 - -
Lal25g0161 966 ProSiteProfiles Protein kinase domain profile. 630 922 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal25g0161 966 MobiDBLite consensus disorder prediction 14 36 - -
Lal25g0161 966 ProSitePatterns Serine/Threonine protein kinases active-site signature. 751 763 IPR008271 GO:0004672|GO:0006468
Lal25g0161 966 Pfam PAS domain 452 544 IPR000014 -
Lal25g0161 966 Pfam PAS domain 167 261 IPR000014 -
Lal25g0161 966 ProSiteProfiles PAC domain profile. 218 272 IPR000700 -
Lal25g0161 966 CDD PAS 444 544 IPR000014 -
Lal25g0161 966 Gene3D Phosphorylase Kinase; domain 1 629 713 - -
Lal25g0161 966 PANTHER FLIPPASE KINASE 1-RELATED 96 966 - -
Lal25g0161 966 Gene3D Transferase(Phosphotransferase) domain 1 714 935 - -
Lal25g0161 966 SMART pac_2 506 548 IPR001610 -
Lal25g0161 966 SMART pac_2 221 263 IPR001610 -
Lal25g0161 966 SUPERFAMILY Protein kinase-like (PK-like) 616 945 IPR011009 -
Lal25g0161 966 CDD STKc_phototropin_like 628 945 - -
Lal25g0161 966 MobiDBLite consensus disorder prediction 341 361 - -
Lal25g0161 966 ProSiteProfiles PAC domain profile. 503 557 IPR000700 -
Lal25g0161 966 MobiDBLite consensus disorder prediction 400 421 - -
Lal25g0161 966 ProSiteProfiles PAS repeat profile. 144 215 IPR000014 -
Lal25g0161 966 Gene3D PAS domain 418 582 - -
Lal25g0161 966 CDD PAS 171 260 IPR000014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0161 Lal-Chr25 1021641 1032816 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0161 4 966 AGC Kinase Gene Family AT3G45780 69.691 0.0 1347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lal25g0161 Pkinase 1.6e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0161 K20715 - gmx:100817565 1476.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0161 25 1021641 1032816 Lal25g0161 25 1021641 1032816 ECH