Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0160 ATGTCTCTACATTCGGACACTGCATTCTCACGCTCCTCCACCTCCACCACAACAACAACCACACCAACAACCCCTAACCACCTCCTCTCGCTGAGCAACTTCGACGACTCACCATGGCAAATCAACAACAGTTGTAGCAACGGTTATAACAGGAGCTGCTATGGTAATGATAACAGTGGGACCCACTGCTACTCTTCTACTCTCTTTGCTGAGTTGCTTCATTCCCACGACGGTCCGAGGAGTAATGGAATGGAACATAATCATAACTCAGAAAGTCCATTGTCAAGTGAATGTAGTATCATCATAGAAGGGATGAACAGAGCCTGTCCATATAGCCCAGAGGAGAAGAAAATCAGGATTGAGAGATATAGAAGCAAGAGAAACCAAAGGAACTTCAACAAGAAAATAAAGTATGTTTGCAGGAAGACATTGGCTGATAGTAGGCCGCGAATTAGAGGAAGGTTTGCGAAGAACGAAGAAATTGGGAAGAATCCTACAGCTCAGTGGAGCCACATTGGTGGTGGAGAGGAAGAGGAAGAGGAAGATGAGAATTGGGTCAGTATCTTTGATTCCTTAGTTGCTGCAAATATTGTTCATGAGTCCCAAGCCAATTCCTCCTTTGGTCTATTATATTAG 636 0.4434 MSLHSDTAFSRSSTSTTTTTTPTTPNHLLSLSNFDDSPWQINNSCSNGYNRSCYGNDNSGTHCYSSTLFAELLHSHDGPRSNGMEHNHNSESPLSSECSIIIEGMNRACPYSPEEKKIRIERYRSKRNQRNFNKKIKYVCRKTLADSRPRIRGRFAKNEEIGKNPTAQWSHIGGGEEEEEEDENWVSIFDSLVAANIVHESQANSSFGLLY 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0160 211 MobiDBLite consensus disorder prediction 1 28 - -
Lal25g0160 211 Pfam CCT motif 119 158 IPR010402 GO:0005515
Lal25g0160 211 PANTHER CCT MOTIF PROTEIN 51 211 - -
Lal25g0160 211 ProSiteProfiles CCT domain profile. 116 158 IPR010402 GO:0005515
Lal25g0160 211 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 51 211 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0160 Lal-Chr25 1016848 1019147 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0160 104 160 C2C2-CO-like Transcription Factor Family AT5G24930 49.123 9.73e-13 64.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lal25g0160 CCT 6.8e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0160 - - lang:109350989 294.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0160 25 1016848 1019147 Lal25g0160 25 1016848 1019147 ECH
Lal25g0160 25 1016848 1019147 Lal2g0257 2 1509116 1512247 PCT
Lal2g0257 2 1509116 1512247 Lal25g0160 25 1016848 1019147 PCT