Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0138 ATGGATCCAAACTTTGTTGAAAATAGTGGTGCTGATTTCTATAATTCAGATCCAAATTATTGGGATCTTAATGGACAGTACCAGAACCTTTTCAATTTCACAAATTCTGAACCTTTTTATCAATTTGATGCTGCTGCTCATGACCCACTTAGTTTTCCTACACGTGATACTTCATTCTTCAACTCTTCTATAGCTGAAGCTCATGTAGTATCATCAGAGCCGTACAATCTCTCATCCCTTGAAGATTCTGAGTTTTCAGAAACTGCTAGGTACATAAGCCAGATTCTCATGGAAGAGGACTTTGAACAAAAGCCATGCATGTATTATGACCCATTGAGTCTACAAATTACTGAGAAATCATTCTCTGATGCCCTGATAGAAAAATTGCCTCATTCACCTGATCAACACCCACTTGACATTCATCAGAATCTGGAGAGTCCAGATGGGAATTGTTCTGGAAGCACTAGTACTGCTGATTCTGGCAGCAGTGGCATCGATAATCGCCACGAGTTGAAGCATCCTCCACCAGATACCCCTGTCTCTGGTGATTATACTTTCCAGTTAAATGCAGATTCTACCTCCCATATACACTCTCAACTTCCTCAGCATGCTTTGACTAGTATTAGTAATGGAATGTTGGATTTGGATTCTGCTGTCACCAAGCTCTTGGCTCAAAATATCTTTAGTGATGCAGACTCTATGTTGCAGTTTAGAAGAGGGTTAGAGGAAGCTAGTAAGTTTCTTCCTCAAGGAACCCAACTTTTTACTGGTCTAGCAAGCAGCCCGGTGTCTCTAAAGCCAAAGGATGAGGTAGAGAAGGTGGCAGTCAAGATAGAGAATGATGTTAGGGAGAACTCATATGCGTTGAAGAGTAGGAAGAATCATGAGCGCGAAGGTGATGGTGTTGAAGAAGAAGGAAGAAACAACAAGCAATCTGCAGTTAGTAGTGTTGAGGAGAGTGGAATATCTGAAATGTTCGACCGAGTGTTGCTTAGTATTGAAAATGTGCCGCTACATGCTGAACAGCAGGATGTATCATTCATAGACAGTAACGATCAACCAAGTGAACAAACACCTTCATCTAATAGAGGGAAGTCTCGTTCGAAGAAACAAGGAAGGAAGAAGGAAACTGTAGATTTGAGGACTCTTTTGATTCTATGTGCACAAGCTGTGTCTGCTAGTGACAACAGGACTGCTAATGAACTACTAAAGCAGATTAGGCAGCATTCTTCTCCCTTAGGTGATGCATCACAGAGGTTGTCTCATTACTTTGCCAATGGTCTGGAGGGACGTTTGGTTGGCGCTGGAACTGGAACCCAAATATTTATTAACTCTCCAAGCTACAAGAAGTTTACTGCTGCTGATTTTCTAAAAGCTTACCAAGTTTATATATCTGCTTGCCCTTTCAAGAAATTAGCACATTTCTTTGCAAACAAAACGATTTTGAAAGTAGCGGAAAATGCAGAAACCCTTCATATTATTGATTTTGGTATCCTGTATGGCTTCCAGTGGCCAATACTTATCAAGTTTCTGTCAAAAAGAAGTGGCGGTCCTCCCAAGCTACGCATCACAGGGATAGAGTATCCCCAACCTGGCTTTCGTCCATCAGAAAGAATTGAGGAGACAGGTCATTGTCTAGCTAACTATTGTAAGCGTTTCGATGTTCCCTTTGAGTTCAAGGCGATAGCATCACGAAACTGGGAAACCATTCTAATTGATGACCTTAAAATCAAGAACAATGAGGTACTTGCTGTGAACTGTCTGATAAGGTTTAGGAATTTACTCGATGAGACAATTGAAGTGAATAGTCCTAGAAATGCAGTTCTGAATTTAATCAGGAAGATAAATCCAGATATTTTTGTTCAATCCATAGTAAATGGATCATACAATGCCCCTTTCTTTGCCACACGCTTCAGGGAGGCACTGTTCCATTTTTCTGCAATTTATGATATGTATGATACTCTCATATCCCGTAACAATGAATGGAGGTTGATGATTGAGAGAGAGATTTCAGGTAGGGAGATTATGAATGTTGTAGCATGTGAAGGTTTTGAGAGGGTTGAGAGGCCTGAGACATACAAACAATGGCAGGCTAGGAATACAAGGGCTGGTTTTAAGCAGATCCCTCTGGATAAGGAACTAATGACGGGGTTTAGGGGGAAAATAAGGGAATGGTATCAGCACGACAGAGATTTTGTGTTTGATGAAGACAACAACTGGATGCTTCAAGGTTGGAAGGGCCGCGTCTTGTATGCTTCCGCTGCTTGGGTGCCTGCATAA 2280 0.4132 MDPNFVENSGADFYNSDPNYWDLNGQYQNLFNFTNSEPFYQFDAAAHDPLSFPTRDTSFFNSSIAEAHVVSSEPYNLSSLEDSEFSETARYISQILMEEDFEQKPCMYYDPLSLQITEKSFSDALIEKLPHSPDQHPLDIHQNLESPDGNCSGSTSTADSGSSGIDNRHELKHPPPDTPVSGDYTFQLNADSTSHIHSQLPQHALTSISNGMLDLDSAVTKLLAQNIFSDADSMLQFRRGLEEASKFLPQGTQLFTGLASSPVSLKPKDEVEKVAVKIENDVRENSYALKSRKNHEREGDGVEEEGRNNKQSAVSSVEESGISEMFDRVLLSIENVPLHAEQQDVSFIDSNDQPSEQTPSSNRGKSRSKKQGRKKETVDLRTLLILCAQAVSASDNRTANELLKQIRQHSSPLGDASQRLSHYFANGLEGRLVGAGTGTQIFINSPSYKKFTAADFLKAYQVYISACPFKKLAHFFANKTILKVAENAETLHIIDFGILYGFQWPILIKFLSKRSGGPPKLRITGIEYPQPGFRPSERIEETGHCLANYCKRFDVPFEFKAIASRNWETILIDDLKIKNNEVLAVNCLIRFRNLLDETIEVNSPRNAVLNLIRKINPDIFVQSIVNGSYNAPFFATRFREALFHFSAIYDMYDTLISRNNEWRLMIEREISGREIMNVVACEGFERVERPETYKQWQARNTRAGFKQIPLDKELMTGFRGKIREWYQHDRDFVFDEDNNWMLQGWKGRVLYASAAWVPA 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0138 759 ProSiteProfiles GRAS family profile. 371 757 IPR005202 -
Lal25g0138 759 MobiDBLite consensus disorder prediction 145 164 - -
Lal25g0138 759 MobiDBLite consensus disorder prediction 346 365 - -
Lal25g0138 759 MobiDBLite consensus disorder prediction 346 375 - -
Lal25g0138 759 MobiDBLite consensus disorder prediction 287 319 - -
Lal25g0138 759 PANTHER SCARECROW-LIKE PROTEIN 34 54 758 - -
Lal25g0138 759 MobiDBLite consensus disorder prediction 130 182 - -
Lal25g0138 759 MobiDBLite consensus disorder prediction 287 307 - -
Lal25g0138 759 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 54 758 IPR005202 -
Lal25g0138 759 Pfam GRAS domain family 380 756 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0138 Lal-Chr25 862262 866729 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0138 90 759 GRAS Transcription Factor Family AT1G07530 51.788 0.0 659
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lal25g0138 GRAS 1.5e-111 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0138 - - adu:107461599 968.378
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0138 25 862262 866729 Lal25g0138 25 862262 866729 ECH
Lal25g0138 25 862262 866729 Lal8g0099 8 718746 720689 LSH
Lal25g0138 25 862262 866729 Lal1g0317 1 1929106 1937800 PCT