Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0130 ATGAATAAGATGAGCAACAACATGAGTTCTGTGAGTAGCTCTGATCTGATAGATGCAAAGCTTGAAGAGCATCAACTGTGTGGATCCAAGCAGTGCCCTGGTTGTGGACACAAATTTGAATCAAAACCGGATTGGGTAGGCCTACCTGCTGGAGTGAAGTTTGATCCAACAGACCAAGAATTAATAGAACACCTTGAAGCCAAGGTGGAGTCCAAGAATATGAAATCACACCCTTTGATTGATGAATTCATTCCTACTATTGAAGGAGAAGATGGTATTTGTTACACTCATCCTGAGAAACTTCCAGGAGTAACAAGAGATGGATTGAGCAGACACTTTTTCCACAGACCCTCAAAGGCTTATACAACTGGAACAAGAAAGAGAAGAAAGATTCAAAACGAGTGTGACTTGCAAGGTGGAGAAACAAGGTGGCACAAGACAGGTAAGACTAGGCCAGTAATGGTGAATGGAAAACAGAAAGGGTGTAAGAAAATTCTAGTCCTATACACCAACTTTGGTAAAAACAGAAAACCTGAGAAGACAAGTTGGGTGATGCACCAATACCATCTAGGCCAGAATGAAGAAGAGAAAGAAGGAGAGCTTGTGGTGTCAAAGATATTCTATCAAACACAGCCAAGACAGTGTAATTGGTCTGATAGAAGTGCAGCAACAACTGGTGAAGGAAGTGGTGAAGTACCTAATAATAATAATAGTGGTAGAAAGGACAGTGGAAGTGGAAGTTGTTCTTCTTCAAAGGAAATAGTGACTCATAGAGATGAGATGTCTGTTGTTGTTGGTGTCCCTTCTCCAATAACAAGTTTCACTCATGCCTTAGATATTCAACAACATCTTAAATCTGATCATTTCAGCTTCATGCCTTTCAGGAAAAGCTTTGATGAGGTTGGAATAGGGGAGGCATCTACAGCAAGAGAAATCCATGCATCAGGCTCATGTGAAGAAGTACACGAACTGCAGAGACCCCAACTTATAGCTCATCATCATCAGCAACATCAACAGCAACAACAACAACATCATCAGCAACATCAAGAGCAACAACAACATCAGCAGCAACATCAAGAGCAACATGTGCAGCATCAAATTGCAACATCAGCCTTTCATATCAATAGGCCTTCACATCCCATCTCTACACTTATCTCTCCGCCTTCCCTCCACCACACATCCATCATTCTCGACGATAATGCTTACCATGTCTCTAGAATTATGCTCCAACAAAATCAACATTTTCAGCAACAACATCATAATCTAGGAACAAGGTCTGCGTCTGGTTTAGAGGAACTCATCATGGGGGGCACTTCAAGTGATATCAAAGAGGAATCATCAATCACAAACCCACAAGAGGCTGAATGGTTGAAGTACTCTTCTTATTGGCCAGACCCTGGCAACCTGAACGATCATCATCATCATGGGTAG 1431 0.4179 MNKMSNNMSSVSSSDLIDAKLEEHQLCGSKQCPGCGHKFESKPDWVGLPAGVKFDPTDQELIEHLEAKVESKNMKSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQNECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTSWVMHQYHLGQNEEEKEGELVVSKIFYQTQPRQCNWSDRSAATTGEGSGEVPNNNNSGRKDSGSGSCSSSKEIVTHRDEMSVVVGVPSPITSFTHALDIQQHLKSDHFSFMPFRKSFDEVGIGEASTAREIHASGSCEEVHELQRPQLIAHHHQQHQQQQQQHHQQHQEQQQHQQQHQEQHVQHQIATSAFHINRPSHPISTLISPPSLHHTSIILDDNAYHVSRIMLQQNQHFQQQHHNLGTRSASGLEELIMGGTSSDIKEESSITNPQEAEWLKYSSYWPDPGNLNDHHHHG 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0130 476 MobiDBLite consensus disorder prediction 217 255 - -
Lal25g0130 476 PANTHER NAC DOMAIN-CONTAINING PROTEIN 75 5 453 - -
Lal25g0130 476 ProSiteProfiles NAC domain profile. 48 209 IPR003441 GO:0003677|GO:0006355
Lal25g0130 476 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 5 453 IPR044799 GO:0003700
Lal25g0130 476 SUPERFAMILY NAC domain 43 209 IPR036093 GO:0003677|GO:0006355
Lal25g0130 476 Pfam No apical meristem (NAM) protein 49 190 IPR003441 GO:0003677|GO:0006355
Lal25g0130 476 MobiDBLite consensus disorder prediction 217 252 - -
Lal25g0130 476 MobiDBLite consensus disorder prediction 331 365 - -
Lal25g0130 476 Gene3D NAC domain 57 213 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0130 Lal-Chr25 815121 821641 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0130 12 463 NAC Transcription Factor Family AT5G56620 52.321 2.36e-138 402
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal25g0130 NAM 4.8e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0130 - - gmx:100791884 736.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1096 16 7391061 7397573 Lal25g0130 25 815121 821641 PCT
Lal23g0572 23 8564239 8570887 Lal25g0130 25 815121 821641 PCT