Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0125 ATGGTGGAGAGCAAAGGAAGAAAGGAAGAGGTTGTTACCAGAGAGTACACCATCAACCTCCACAAACGCTTACATGGCTGCACATTTAAGAAGAAAGCTCCAAAAGCAATAAAGGAGATCAGGAAATTTGCCCAGAAAGCCATGGGGACAAATGATGTTAGAGTGGATGTGAAGCTGAACAAGTTTGTCTGGAGCCAGGGGATCAGAAGTGTCCCTAGGAGGATTAGGGTACGTATTGCTCGCAAGAGGAATGATGACGAAGATGCCAAGGAAGAGCTCTACTCTCTTGTCACTGTTGTTGAAATCCCTAAGGACGAGCTCAAAGGATTGGGCACCAAGGTCATTGACGACGAGGATTGA 360 0.4639 MVESKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTNDVRVDVKLNKFVWSQGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVVEIPKDELKGLGTKVIDDED 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0125 119 Gene3D - 8 119 IPR023621 -
Lal25g0125 119 SMART Ribosomal_L31e_2 9 92 IPR000054 GO:0003735|GO:0005840|GO:0006412
Lal25g0125 119 PANTHER OS06G0319700 PROTEIN 6 119 - -
Lal25g0125 119 PANTHER 60S RIBOSOMAL PROTEIN L31 6 119 IPR000054 GO:0003735|GO:0005840|GO:0006412
Lal25g0125 119 CDD Ribosomal_L31e 8 91 IPR000054 GO:0003735|GO:0005840|GO:0006412
Lal25g0125 119 Pfam Ribosomal protein L31e 10 91 IPR000054 GO:0003735|GO:0005840|GO:0006412
Lal25g0125 119 SUPERFAMILY Ribosomal protein L31e 10 91 IPR023621 -
Lal25g0125 119 ProSitePatterns Ribosomal protein L31e signature. 53 67 IPR020052 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0125 Lal-Chr25 789251 791009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0125 1 119 Cytoplasmic Ribosomal Protein Gene Family AT4G26230 80.672 3.89e-68 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0125 K02910 - gmx:100305583 218.009