Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0114 ATGGAGCGATCTCAGCCTAAGGTGCTAAGACTAAATTTGATAAGTTCAACAAATATGGAAATTAAATCAGGTTGTCCATTGCAATCAAAGTTGAATGCATATCCAGGAAACTTGAAGGAAAAGTCTGAACATCAAGATATGATTAGAGGCCTAGCTGTTACTGCTGTTAGTAGTCCTGAACAAGGGTCCACCTTGACTACTATTGAAATTGGAACATCATCAGTATGGAGCTCAGAAATCGGTGCTTCTCCATTTTCTCACTATGATAATTGTGAAAGAAAAATGAGAGGTTTTCCCTTTATTCATGAGAAAAGTGAATCTGATTCTGAGTGTGAGGATCTGAGTTTTTCATCCAAAAGTTCATATTTCCAGCCATGGGTTACAAATGCAATTTCAAAACAAGAAGACAGTATTATGCTAAAGTCCAGTGATAAGGCTTTGGTTTCTACCTATGAAGCATTTCTTAAAAAATTATCAAAGTTGGATCAAGATCCTGGGTTAGTAGGCCTTAAACTTAATTCCAAACTTGATGTAAACTTAAGCAGAAGTGTTAGAGCGGCAATTTCACTAACCACAAATGCCCCTCTTGGTCCTCCTCCATTGTGCACCATATGTCAGCACAAGGCACCTATATTTGGGAACCCTCCAAGATGGTTTACATTTTCTGAGTTGCAACTTGCCACTAGTGGATTTTCGCATGCAAATTTCTTGGCTGAAGGTGGGTTTGGTTCAGTACACCGCGGTGTTCTACCTGATGGGAAGATCATTGCTGTGAAGCAGTATAAATTATCTAGTACTCAAGGTGATGAAGAATTTTGCTCAGAAGTGGAGATCTTAAGTTGTGCACAACACCGTAATGTTGTGATGCTAATTGGATTTTGTGTGGAGGATGGAAGAAGACTTCTAGTTTATGAATATATATGCAATGGATCTTTATATTCTCTACTTCATGGACAGAAGAAGAATGCGTTGGAATGGTCTGCACGTCAAAAAATAGCAGTGGGAGCAGCTCGTGGTTTGAGATACCTTCATGAAGAGTGTAGAGTGGGTTGTATTGTGCACTGTGATATGCGGCCTAACAACATTTTCCTCACTCATGATTTTGAAGCATTAGTGGGAGATTTTGGACTTGCTAGGTGGCAGCCGAATAGAGAATTTGAAGTAGAAACCAGAGTGATAGGAACATTTGGGTATTTGGCACCAGAATATACTCAAAGTGGTGAAATCACTGAGAAAGCAGATGTGTATTCCTTTGGCATAGTATTACTAGAGCTTGTCACAGGAAGGAAAGTTGTGGATATAAACAGGCCTAAAGGCCAGCAATGCCTCCATGAATGGGCACGACCATTGCTTAAAGGGCATGCCATTCATGAATTGGTTGATCCTGTTATAAGAAACTGCTATGATGATCACGAGGTTCATCGTATGCTGCAATGTTCATCGCTGTGCATCCAGAAGGATCCTTGTCTAAGGCCTCAAATGTCTCAGGTGCTTCGGATGCTGGAAGGTGACATTTTCTTATGA 1524 0.4029 MERSQPKVLRLNLISSTNMEIKSGCPLQSKLNAYPGNLKEKSEHQDMIRGLAVTAVSSPEQGSTLTTIEIGTSSVWSSEIGASPFSHYDNCERKMRGFPFIHEKSESDSECEDLSFSSKSSYFQPWVTNAISKQEDSIMLKSSDKALVSTYEAFLKKLSKLDQDPGLVGLKLNSKLDVNLSRSVRAAISLTTNAPLGPPPLCTICQHKAPIFGNPPRWFTFSELQLATSGFSHANFLAEGGFGSVHRGVLPDGKIIAVKQYKLSSTQGDEEFCSEVEILSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLYSLLHGQKKNALEWSARQKIAVGAARGLRYLHEECRVGCIVHCDMRPNNIFLTHDFEALVGDFGLARWQPNREFEVETRVIGTFGYLAPEYTQSGEITEKADVYSFGIVLLELVTGRKVVDINRPKGQQCLHEWARPLLKGHAIHELVDPVIRNCYDDHEVHRMLQCSSLCIQKDPCLRPQMSQVLRMLEGDIFL 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0114 507 CDD STKc_IRAK 237 503 - -
Lal25g0114 507 Gene3D Transferase(Phosphotransferase) domain 1 307 505 - -
Lal25g0114 507 Pfam Protein kinase domain 237 499 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal25g0114 507 PANTHER OS01G0253100 PROTEIN 1 507 IPR045271 GO:0004714|GO:0006468
Lal25g0114 507 SUPERFAMILY Protein kinase-like (PK-like) 215 502 IPR011009 -
Lal25g0114 507 Gene3D Phosphorylase Kinase; domain 1 203 306 - -
Lal25g0114 507 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 1 507 - -
Lal25g0114 507 ProSitePatterns Tyrosine protein kinases specific active-site signature. 352 364 IPR008266 GO:0004672|GO:0006468
Lal25g0114 507 ProSiteProfiles Protein kinase domain profile. 231 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0114 Lal-Chr25 737122 740235 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0114 181 497 Trihelix Transcription Factor Family AT1G68690 47.826 7.87e-98 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Lal25g0114 Pkinase 1.9e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0114 - - aprc:113855006 770.385