Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0110 ATGACCAACTTTCCTTATTTTGGTAAGTACCCACACCATCTTCCTATTTTTCCTCTCAAAAAATTCTTCAACTTCCATGGATCTTTGTCACAACTTATTCTACTCTTTCATTATGTCAAGAGCCCTTTTTTAATTGAACTTTGTTATTTCATAATCATTTCTCTTCTTGGTTACTTGGGTCTCAAGTTCTCAAAGCCTAGAACCCATGTTATTCACAAGGACCTTGATCTCTTTTACACCTCAGTTTCTGCCTCCACAGTTTCTAGCATGGCAGCATTAGAAATGGAGATTTTCTCTAATTTTCAACTCATTCTTCTTACCTTTCTTATGTTAGCAGGAGGAGAAGCATATATTTCTATGCTAGAACTTGTAATTGCAACACAAAATTTTAAAAGAAACAAATTAACCTCTACTCTTGCAATGGAACAAAAGCCAATTCAAGTTGAGCTTGGTTTAGTTTCTATAGAAAATAACAAGCATAGTCATGAGTGTGACATTGATCATGTTCCAAATGTTATGGTAGGGTACTTTAATGATAGGGATACAAGGCTTAAATATAACTCTCTTAGGTATTTGCTATATGTTATTATAGGTTACCTTGTGGTAGTTCATCTTGTAGGGTCTAGTTTGGTATCTTTGTACATAAGCTTTATACCAAGTGCAAGACAAATACTAAAACCCAAAGGCATTGAAATACAAACATTCTCATTCTTCATCATAGTTTCTTCTTTTGCTAATTGTGGTTTTGTCCCAACCAATGAGAACATGATAGTTTTCAAGAACAACTCAGGTCTCCTCCTTCTAATTATCCCACATATCCTTCTTGGTAACACACTTTATGTACCATGTTTGAGGCTAGTGATATGGCTTATGAAGAAAGTTACTAGAAGAGATGAATTCTCTTACTTGCTTAATAATTCAAAAGAGGTTGGTTATGATCATTTGATCCCTTCTTCTCATCATTGTTGGCTATTGGCTGTTACTGTTTTGGGACTCAATTTGATACAATTTGTAATGTTTTGCTCAATGGAGTGGAACTCTAAAAACATGGAGGGTCTAAATATGTATCAGAAAGTGGTTGCTTCTATGTTTCAAGTTATAAATGCTAGACATTCTGGTGAAAGTGTTTTCGATCTCTCATCCATATCTTCAGCTATATTGGTGCTCTTCATTGTCATGATTGCATATGGGAATGTAGGATTCACAACAGGGTACAGCTGCAGAAGGCAAGTGAAAGCAGATGGTATGTGTAAAGATTCATATATAGGATTTTCGGGTAAGTGGAGTAGCCAAGGCAAGTTCATCCTTATTGTGGTCATGTTCTTTGGGAGGCTCAAGAAATTCAATATGAATGGGGGCAAAGCTTGA 1368 0.356 MTNFPYFGKYPHHLPIFPLKKFFNFHGSLSQLILLFHYVKSPFLIELCYFIIISLLGYLGLKFSKPRTHVIHKDLDLFYTSVSASTVSSMAALEMEIFSNFQLILLTFLMLAGGEAYISMLELVIATQNFKRNKLTSTLAMEQKPIQVELGLVSIENNKHSHECDIDHVPNVMVGYFNDRDTRLKYNSLRYLLYVIIGYLVVVHLVGSSLVSLYISFIPSARQILKPKGIEIQTFSFFIIVSSFANCGFVPTNENMIVFKNNSGLLLLIIPHILLGNTLYVPCLRLVIWLMKKVTRRDEFSYLLNNSKEVGYDHLIPSSHHCWLLAVTVLGLNLIQFVMFCSMEWNSKNMEGLNMYQKVVASMFQVINARHSGESVFDLSSISSAILVLFIVMIAYGNVGFTTGYSCRRQVKADGMCKDSYIGFSGKWSSQGKFILIVVMFFGRLKKFNMNGGKA 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0110 455 Pfam Cation transport protein 185 397 IPR003445 GO:0006812|GO:0008324|GO:0055085
Lal25g0110 455 PANTHER SODIUM TRANSPORTER HKT1 395 455 - -
Lal25g0110 455 PANTHER SODIUM TRANSPORTER HKT1 35 394 - -
Lal25g0110 455 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 395 455 - -
Lal25g0110 455 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 35 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0110 Lal-Chr25 717813 720304 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0110 392 455 Inorganic Solute Cotransporters AT4G10310 61.538 3.60e-21 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0110 K24976 - gmx:100800875 419.083