Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0102 ATGAGAATATTTGTGCTGTTGGAAGTGTTTATGTTATTGTTGCATGCTCTAGTTTCAGCACTGAACTCAGATGGAGTGGCACTGTTATCATTCATGAGTCACTGGACATTTGTGCCACCTTCCATTAACTCAACTTGGTCTTCCTCTCATTCTAATCCATGCTCCTCTTGGGTTGGAATTCACTGTGACCATCATCACCATGTTGTTTCTCTTAACCTCTCTGGTTATAACATTCCTGGCCAATTAGGACCTGAACTTTCAACTTGTACTTTTCTACAATCTCTAGACCTTACTTCAAACAACTTTTCAGGCCAAATACCTGAACCCTTCAAAAACCTTCATAAACTTAAGTATCTAAGCCTTTCCTCTAACTATTTGAGTGGTCAAGTTCCTCATTTTTTCACTCAAATCACTCAACTAGAGTTTTTTGATCTCTCTTATAACAGTTTGAGTGGTTATATTCCTACAAGTATTGGCAACATGACTCATCTCTTGCAATTGTTTCTTCAAGGTAATTACTTATCTGGCACTATTCCATCATCCATTGGGAACTGCACTAAGTTACAAGATTTGTACTTGGATGATAATAATCTGCAGGGTGTTCTTCCTGAGACACTTAACAATCTCAATGATCTTGTGTCTCTTGATGTCAGCCACAATAGTCTTAAGGGTATCATTCCATTGAGTTTTTCTGGCACTTGTAGTCAAAATCTACAGTTTTTGGATCTATCTTTCAATGTGTTTAGTGGAGGCATTCCCTCAAGTTTGGGAAATTGTAGTGCTTTATCACAATTTGCTTGTGTGGCTTGTAACTTAGTTGGAACTATTCCATCCTCCTTTGGTCTACTCACCAAGCTTACCATTCTAAGGCTTCCTGAGAACCATTTATCTGGGAAAATACCACCTGAAATTGGTAACTGTAAGTCTTTGACAGAGTTACATTTATACTCGAACCGACTCGAAGGAAAGATTCCAAGTGAACTAGGGAAATTGAGTGAGCTACAAGACCTTGAATTGTTTTCCAATCAATTGAGTGGTGAAATTCCACTTGGGATATGGAAGATTGAAGGTCTTAAGCATCTCCTTGTGTATAACAATAGTCTTCATGGGGAACTACCTTTGGAGATGACACAACTCAAGCAACTGCAAAATATCACATTGTTTAACAACCAATTCTCAGGAGTCATTCCTCAAAGCTTAGGAATTAATAGCAGTTTAGTAGAGTTGGATTTCACAAATAATAAGTTCGGTGGTGAACTTCCACCAAATCTTTGTTTTGGGAAGAAACTGAGCATTTTGACTATTGGCATTAATCAATTTCAAGGTAGCATACCTACTGATGTTGGAAGGTGTACAACTCTTAGAAGGGTCATTCTTAAACAAAACAATTTTACTGGGCCACTTCCTGATTTTGAAAGGAATCTGAATCTCAATTATATGGATATCAGCAAAAACAAAATCAATGCTACAATCCCATCAAGTTTGGGGAATTGCACAGTTCTAACTGATTTAATTTTGTCCAGGAACAGATTTTCAGGGCTTATACCCCCAGAGCTAGGAAATCTTGTGAATATTCGGACTTTGGATCTTTCTCACAACAACTTAGAAGGTCCTTTGCCTTCTCATTTATCAAACTGCACCAAAATGGACAAGTTTGATGTTGGATTCAATTTCTTAAGCGGTTTGTTGCCATCAAGTTTGCGGAGCTGGAAGGGGCTAAGCTCGTTGAATTTAAAAGAGAATCGATTTAGCGGGGGCATCCCGGATTTCTTGTCAGAATTTGAAAGGCTTTATGAACTACAACTTGGTGGAAATATGCTTGGAGGAAGAATTCCTGGATCCATTGGAGCATTGCAAAATTTGATTTACGGGTTGAATCTAAGTTCTAATGGGCTGATAGGTGACATTCCTGTAGAGATTGGGAATCTGAAGAGTTTGCTATTACTGGATCTGTCTCAGAACAATTTGACAGGTAGCATTGAAGCTCTTGATGATCTTCATTCACTAGTTGAAATCAATATTTCATACAATTCCTTTCATGGACCTGTACCAAATATGCTGATGAAGTTGCTTAATTCTCCGATGACATCATTTATGGGCAATCCCGGCTTATGTATCAACTGTTCACCGCCGAACGGCTCAGTTTGCAACGAAAACAGCTATCTCAAACAATGTGATAATAAACCAGTTAACCATAAAGGCCTCGGTAAATTTGAAATTGCAATGATAGTGCTTGGAACCTCAATATTTGTTGTTTTGGTTCTGCTAGTATTAGTTTATATGTTTGTTTTTAGAAGAAAATCAAAGCAGGAAGTGAATATCTCTGCCAGAGAAGGTACTTCATCCCTTTTCACCAAAGTCATGGAGGCTACAGCAAACCTAAATGATCGTTATGTTATCGGAAGAGGAGCCCACGGAGTTGTTTATAAAGCCGCAATACGCCCGGACAAAGTTTATGCTGTAAAGAAGCTAGGATTTGCAGCTAGCAGAGGTAAGAATCTGAGCATGGTTAGAGAAATTCAAACCCTTGGAAAAATTAGGCATCGAAATCTGGTGAAATTGGAAGAGTTTTGGTTTAAGAAAGATTATGGTCTAATTTTGTATAGCTACATGCCAAATGGTAGCCTTCATGATGTTTTGCATGAAAAGAATCCACCACAATCCTTAGAGTGGAATGTGAGATATAAGATAGCTGTTGGAATTGCTAATGGATTGGCTTATCTCCATTATGACTGTGACCCTTCCATAGTGCACCGAGACATCAAGCCGAACAATATACTTCTGGACTCTGATATGGAGCCTCATATTGCTGACTTTGGTATTGCCAAACTTTTGGATCAATCTTCTACTTCTTCAAATCCTTCCATGTTAGTTCCCGGTACAATTGGCTATATTGCACCAGAGAATGCTTATACAACAGCAAATAGCCGGGAATCGGATGTATACAGTTACGGGGTAGTTTTGCTTGAGCTGATAACGAGAAAGAAGGCGGCGAGTGAGTCATTTACGGAGGAGGGTAGTACTATAGTGGTTTGGGTTAGATCTATGTGGGAGGAAACAAGAGGAGAAATTCATGAAATTGTTGATTCAAGCCTTGCACAGGAATGTCTAGATACTCATATAATGGAACAAGTTACCCAAGTTCTTATGGTGGCTTTGAGATGTACTGAAAAGGATCCACACAATAGACCAACAATGAGAGATGTTATCAAACAATTATCTTATGCTAATCTAAGACCAGCAAGTATAAAGAGTTAG 3258 0.3861 MRIFVLLEVFMLLLHALVSALNSDGVALLSFMSHWTFVPPSINSTWSSSHSNPCSSWVGIHCDHHHHVVSLNLSGYNIPGQLGPELSTCTFLQSLDLTSNNFSGQIPEPFKNLHKLKYLSLSSNYLSGQVPHFFTQITQLEFFDLSYNSLSGYIPTSIGNMTHLLQLFLQGNYLSGTIPSSIGNCTKLQDLYLDDNNLQGVLPETLNNLNDLVSLDVSHNSLKGIIPLSFSGTCSQNLQFLDLSFNVFSGGIPSSLGNCSALSQFACVACNLVGTIPSSFGLLTKLTILRLPENHLSGKIPPEIGNCKSLTELHLYSNRLEGKIPSELGKLSELQDLELFSNQLSGEIPLGIWKIEGLKHLLVYNNSLHGELPLEMTQLKQLQNITLFNNQFSGVIPQSLGINSSLVELDFTNNKFGGELPPNLCFGKKLSILTIGINQFQGSIPTDVGRCTTLRRVILKQNNFTGPLPDFERNLNLNYMDISKNKINATIPSSLGNCTVLTDLILSRNRFSGLIPPELGNLVNIRTLDLSHNNLEGPLPSHLSNCTKMDKFDVGFNFLSGLLPSSLRSWKGLSSLNLKENRFSGGIPDFLSEFERLYELQLGGNMLGGRIPGSIGALQNLIYGLNLSSNGLIGDIPVEIGNLKSLLLLDLSQNNLTGSIEALDDLHSLVEINISYNSFHGPVPNMLMKLLNSPMTSFMGNPGLCINCSPPNGSVCNENSYLKQCDNKPVNHKGLGKFEIAMIVLGTSIFVVLVLLVLVYMFVFRRKSKQEVNISAREGTSSLFTKVMEATANLNDRYVIGRGAHGVVYKAAIRPDKVYAVKKLGFAASRGKNLSMVREIQTLGKIRHRNLVKLEEFWFKKDYGLILYSYMPNGSLHDVLHEKNPPQSLEWNVRYKIAVGIANGLAYLHYDCDPSIVHRDIKPNNILLDSDMEPHIADFGIAKLLDQSSTSSNPSMLVPGTIGYIAPENAYTTANSRESDVYSYGVVLLELITRKKAASESFTEEGSTIVVWVRSMWEETRGEIHEIVDSSLAQECLDTHIMEQVTQVLMVALRCTEKDPHNRPTMRDVIKQLSYANLRPASIKS 1085
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0102 1085 SMART LRR_typ_2 283 307 IPR003591 -
Lal25g0102 1085 SMART LRR_typ_2 522 546 IPR003591 -
Lal25g0102 1085 SMART LRR_typ_2 643 665 IPR003591 -
Lal25g0102 1085 SMART LRR_typ_2 331 355 IPR003591 -
Lal25g0102 1085 SMART LRR_typ_2 186 208 IPR003591 -
Lal25g0102 1085 SMART LRR_typ_2 209 232 IPR003591 -
Lal25g0102 1085 SMART LRR_typ_2 161 185 IPR003591 -
Lal25g0102 1085 SMART LRR_typ_2 113 136 IPR003591 -
Lal25g0102 1085 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 84 1072 - -
Lal25g0102 1085 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 5 87 - -
Lal25g0102 1085 ProSitePatterns Protein kinases ATP-binding region signature. 800 823 IPR017441 GO:0005524
Lal25g0102 1085 Gene3D Phosphorylase Kinase; domain 1 763 870 - -
Lal25g0102 1085 ProSiteProfiles Protein kinase domain profile. 794 1078 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal25g0102 1085 Pfam Leucine rich repeat 187 246 IPR001611 GO:0005515
Lal25g0102 1085 Pfam Leucine rich repeat 92 150 IPR001611 GO:0005515
Lal25g0102 1085 Pfam Leucine rich repeat 476 535 IPR001611 GO:0005515
Lal25g0102 1085 SMART serkin_6 794 1076 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal25g0102 1085 Gene3D Ribonuclease Inhibitor 24 134 IPR032675 -
Lal25g0102 1085 Pfam Protein kinase domain 799 1071 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal25g0102 1085 Gene3D Transferase(Phosphotransferase) domain 1 871 1081 - -
Lal25g0102 1085 Gene3D Ribonuclease Inhibitor 214 475 IPR032675 -
Lal25g0102 1085 SUPERFAMILY Protein kinase-like (PK-like) 779 1074 IPR011009 -
Lal25g0102 1085 SUPERFAMILY RNI-like 202 512 - -
Lal25g0102 1085 SUPERFAMILY L domain-like 22 297 - -
Lal25g0102 1085 SUPERFAMILY L domain-like 450 709 - -
Lal25g0102 1085 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 5 87 - -
Lal25g0102 1085 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 84 1072 - -
Lal25g0102 1085 Pfam Leucine rich repeat N-terminal domain 22 63 IPR013210 -
Lal25g0102 1085 PRINTS Leucine-rich repeat signature 212 225 - -
Lal25g0102 1085 PRINTS Leucine-rich repeat signature 522 535 - -
Lal25g0102 1085 Gene3D Ribonuclease Inhibitor 135 213 IPR032675 -
Lal25g0102 1085 ProSitePatterns Serine/Threonine protein kinases active-site signature. 916 928 IPR008271 GO:0004672|GO:0006468
Lal25g0102 1085 Gene3D Ribonuclease Inhibitor 476 722 IPR032675 -
Lal25g0102 1085 ProSiteProfiles Leucine-rich repeat profile. 645 667 IPR001611 GO:0005515
Lal25g0102 1085 SMART LRR_sd22_2 331 360 - -
Lal25g0102 1085 SMART LRR_sd22_2 643 665 - -
Lal25g0102 1085 SMART LRR_sd22_2 113 142 - -
Lal25g0102 1085 SMART LRR_sd22_2 209 230 - -
Lal25g0102 1085 SMART LRR_sd22_2 522 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0102 Lal-Chr25 669243 678864 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0102 18 1073 Receptor kinase-like Gene Family AT1G73080 51.282 0.0 1023
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lal25g0102 Pkinase 2.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0102 - - gmx:100778035 1494.56