Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0101 ATGCTTTTGTTCCTTTTTTCCCATCCATGGGTTTCAGGTGCCAAAGTGAGAGAGAAAATAGAGTGTGATGTAATTACTAGAGGGTTAGGCAGAAGAGGCTGTTATGTGTTGCCTCAGATCCAATCAATTGTGCAAAAAAAGGGTGTTTTCTTCTCATTAGAGTTGACCAAGATAGGGGTTTCAATGGAGGAGATTTCGTTTGCGGTTGCGGTGGCATTAAGAGTAGGTAATTTAGTCTGTGATAATAATCCAACTGTAGCTACTACGCACATGGATGTATCAAGGTTTAAGCTCATGGGAGATGCTGGGTTGTTATGTGATTCTGTAACTGAGTTAGAGACAGTAGCAAGTTCTGATGATCGTCATAATCAAGTTGGCATTGTAGAAGTTGCGTCACCAGAACAGGATAGGGAAGGTGATATTTCTTTGTTGGACACAATTTCCCAAAATAAAAGCAGCATTTTGGATGCCAACGATGGTGCATTAGTCCATGAAGTTGAGGAGGATAATTCATTGTCATTGGAAGGTGATCTGATAATTGATAGTTCATGCTCTCATTCGGCAGTAAGTGAGAACAGTAGCATGTGTGATGAGGAGTTCATCAATGTTGAGGCTAATTCAGATGTTGGAACACCACGTTCCTCAGACATAGATAAGAGTGTTTGTGGTGCCAATATTGTTGCCCAGCCTGCTGATTTGGTGGAATCACATGTTGTGACAGATATTATGAGTGAACCCCTTGCAATTGCAGGTAGCCTTGAAGAAGATAACGGAATAGGGTCTGTCCCTGAGCCTTCTGCAATTGGTCTTCATCAGCAAGAAAAAGGGGTGAGTGGAACAGTTGGGCGGAGCGTTTTTGAATTGGACTATGCCCCACTTTGGGGATTTATATCTCTCTGTGGAAGAAGACCAGAAATGGAAGATGCAGTTACAACTGTACCTCGGTTTTTGAAAATCCCTATTCAAATGCTAATTGGTGACCGGGTTCTTGATGGAATGAACAAGTGTTTCGATCAGCAGATGATTCATTTCTTTGGAGTTTATGATGGTCATGGTGGTTCTCAGGTGGCAGATTATTGTCGTGATCGTATCCATTTGGCCTTGGCTGAGGAAATAGAACTTGTCAAGGAAGGTCTGATTAGTGGAAGTATGATGGATGGTTGTCTAGATCAGTGGAAAAAAGCTTTTACCGATTGTTTCGTGAAGGTTGATGCTGAAGTTGGAGGAAAAGTTAATAATGAACCTGTTGCCCCAGAAACTGTTGGTTCCACGGCTGTTGTTGCTATTATCTGTTCATCTCATATCATAATCGCGAACTGTGGTGATTCAAGAGCGGTTCTTTGTCGTGGCAAGGAACCCATGGCATTATCAGTGGACCATAAACCTAATCGAGATGATGAGTATGCAAGAATTGAGGCAGCTGGTGGAAAGGTGATACAATGGAATGGATATCGTGTATGTGGTGTTCTTGCAATGTCACGGTCTATTGGTGATAGATATTTGAACCCGTGGATTATTCCAGAACCAGAAGTTATGTTTCTTCCTCGTGCGAAAGATGACGAGTGTCTCATTCTAGCCAGTGATGGTCTGTGGGATGTCATGACAAATGAAGAGGTGTGTGACCTTGCTCGGAAACGGTTACTTCTCTGGCACAAGAAAAATGGATCGGAACTACCCCCAGAGAGGGGAAAAGGAATTGATCCTGCTGCACAGGCAGCAGCAGAGTACCTAGCGCACCGTGCTCTTCAGAAAGGAAGCAAAGATAACATAACTGTCATTGTAGTGGATTTAAAAGCTCAGAGAAAATTCAAGAGCAAGACATGA 1824 0.4276 MLLFLFSHPWVSGAKVREKIECDVITRGLGRRGCYVLPQIQSIVQKKGVFFSLELTKIGVSMEEISFAVAVALRVGNLVCDNNPTVATTHMDVSRFKLMGDAGLLCDSVTELETVASSDDRHNQVGIVEVASPEQDREGDISLLDTISQNKSSILDANDGALVHEVEEDNSLSLEGDLIIDSSCSHSAVSENSSMCDEEFINVEANSDVGTPRSSDIDKSVCGANIVAQPADLVESHVVTDIMSEPLAIAGSLEEDNGIGSVPEPSAIGLHQQEKGVSGTVGRSVFELDYAPLWGFISLCGRRPEMEDAVTTVPRFLKIPIQMLIGDRVLDGMNKCFDQQMIHFFGVYDGHGGSQVADYCRDRIHLALAEEIELVKEGLISGSMMDGCLDQWKKAFTDCFVKVDAEVGGKVNNEPVAPETVGSTAVVAIICSSHIIIANCGDSRAVLCRGKEPMALSVDHKPNRDDEYARIEAAGGKVIQWNGYRVCGVLAMSRSIGDRYLNPWIIPEPEVMFLPRAKDDECLILASDGLWDVMTNEEVCDLARKRLLLWHKKNGSELPPERGKGIDPAAQAAAEYLAHRALQKGSKDNITVIVVDLKAQRKFKSKT 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0101 607 Pfam Protein phosphatase 2C 326 590 IPR001932 -
Lal25g0101 607 CDD PP2Cc 298 597 IPR001932 -
Lal25g0101 607 SMART PP2C_4 279 595 IPR001932 -
Lal25g0101 607 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 157 607 - -
Lal25g0101 607 SUPERFAMILY PP2C-like 289 598 IPR036457 -
Lal25g0101 607 ProSiteProfiles PPM-type phosphatase domain profile. 293 597 IPR001932 -
Lal25g0101 607 Gene3D - 280 607 IPR036457 -
Lal25g0101 607 PANTHER ALPHABET, ISOFORM E-RELATED 157 607 - -
Lal25g0101 607 ProSitePatterns PPM-type phosphatase domain signature. 344 352 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0101 Lal-Chr25 660246 664391 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0101 62 607 PP2C-type Phosphatase Gene Family AT1G17550 48.387 8.53e-166 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0101 K14497 - gmx:100805281 812.372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0101 25 660246 664391 Lal25g0101 25 660246 664391 ECH