Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0099 ATGCTAAAGCCTATATATATTGAATGCATGGTGATCCTTTGTTGTCATATGAATAGTGGTACCAAAATGACAGATAAAAATGAAAGAGCAGCAGATTCTTCACCAGACAGTGATTTCACCAACCAGTGGTGTGTTGAGCTCTCTGAGTACTTAAAGTTTGATGGTAATAATGAATGGGTAGTTGATGATGATCCTGGTTCATTTGTTTCTGATCATGTTTCAAACCAGATGGTATATGATCAAGCCAATGTTGTTAGTGCCTTTGGAGAAGGTAGTGGCATTCTCTTTGAAGGGTCTTCTTCTACAAGAGAAATTAGCAGTGTACAACAGAAGAAAGTTAGAGAGAAATTTGCATTAAAAACAAAGTCAGAGGTTGAAATCCTGGATGATGGATACAAGTGGAGAAAATATGGAAAGAAGATGGTGAAGAACAGTCCAAATCCAAGGCATTACTATAGGTGTTCAGTGGAAGGATGCCATGTAAAAAAGACAGTAGACAGAGATAGGGATGATCCAAGGTATGTAATAACAACCTATGGAGGAACTCACACTCACCCAAGGTAG 564 0.383 MLKPIYIECMVILCCHMNSGTKMTDKNERAADSSPDSDFTNQWCVELSEYLKFDGNNEWVVDDDPGSFVSDHVSNQMVYDQANVVSAFGEGSGILFEGSSSTREISSVQQKKVREKFALKTKSEVEILDDGYKWRKYGKKMVKNSPNPRHYYRCSVEGCHVKKTVDRDRDDPRYVITTYGGTHTHPR 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0099 187 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 23 186 IPR044810 GO:0003700
Lal25g0099 187 Pfam WRKY DNA -binding domain 129 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal25g0099 187 SUPERFAMILY WRKY DNA-binding domain 121 186 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal25g0099 187 SMART WRKY_cls 128 187 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal25g0099 187 ProSiteProfiles WRKY domain profile. 123 187 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal25g0099 187 Gene3D WRKY domain 115 181 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal25g0099 187 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 23 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0099 Lal-Chr25 653844 659699 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0099 49 185 WRKY Transcription Factor Family AT5G26170 46.358 7.50e-38 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lal25g0099 WRKY 2e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0099 - - lang:109358189 231.491