Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0093 ATGCGAGATGGATCTAAGTCCCTGGCCAAAATACTGGCAAAGTGGAAGGAATATAATGCCCAGCTTGATTCCAACAATGATGGAGATAAGCCGATTCGAAAAGTTCCTGCTAAGGGATCAAGGAAGGGGTGTATGAAAGGTAAAGGAGGACCCGAAAACTTGCGATGTAACTACAGAGGTGTTAGGCAAAGGACTTGGGGAAAATGGGTTGCTGAAATCCGGGAGCCGAATAGAGGGAATAGGCTTTGGTTAGGTACTTTTCCCAGTGCCATTGGTGCTGCTCTTGCTTATGATGAAGCAGCTAGGGCAATGTATGGCTCTTGTGCCCGTCTCAACTTTCCTAATGTTTCAGTTTCTAGTTTCTCTGAAGAATTTCCAAATGATTCTCTTGGCGAAAATCATTCTGGTTCCTCGATGGCAGTCTTAGCAAACACCGAGTCTACGGTATCACCAAACACACAAGAGGATATTGATATGGAACACATTTCGTTATCCTTAACTATAAAACATGATAATGGAGAAGGTGAGTCAGGGTCTAGTTCTTCTCCTCCTTCATCCTCGTGA 564 0.4415 MRDGSKSLAKILAKWKEYNAQLDSNNDGDKPIRKVPAKGSRKGCMKGKGGPENLRCNYRGVRQRTWGKWVAEIREPNRGNRLWLGTFPSAIGAALAYDEAARAMYGSCARLNFPNVSVSSFSEEFPNDSLGENHSGSSMAVLANTESTVSPNTQEDIDMEHISLSLTIKHDNGEGESGSSSSPPSSS 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0093 187 MobiDBLite consensus disorder prediction 167 187 - -
Lal25g0093 187 MobiDBLite consensus disorder prediction 170 187 - -
Lal25g0093 187 MobiDBLite consensus disorder prediction 23 47 - -
Lal25g0093 187 ProSiteProfiles AP2/ERF domain profile. 57 114 IPR001471 GO:0003700|GO:0006355
Lal25g0093 187 Gene3D AP2/ERF domain 57 116 IPR036955 GO:0003700|GO:0006355
Lal25g0093 187 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 2 156 - -
Lal25g0093 187 CDD AP2 56 116 IPR001471 GO:0003700|GO:0006355
Lal25g0093 187 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 2 156 - -
Lal25g0093 187 PRINTS Ethylene responsive element binding protein signature 58 69 IPR001471 GO:0003700|GO:0006355
Lal25g0093 187 PRINTS Ethylene responsive element binding protein signature 96 116 IPR001471 GO:0003700|GO:0006355
Lal25g0093 187 SMART rav1_2 57 120 IPR001471 GO:0003700|GO:0006355
Lal25g0093 187 Pfam AP2 domain 56 106 IPR001471 GO:0003700|GO:0006355
Lal25g0093 187 SUPERFAMILY DNA-binding domain 57 114 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0093 Lal-Chr25 624196 624759 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0093 4 114 AP2-EREBP Transcription Factor Family AT2G40350 66.087 7.66e-51 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lal25g0093 AP2 6.9e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0093 - K09286 gmx:100499747 292.352