Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0089 ATGCACGTAACACATAGCATGAAATCTGAGTTAAAGGGTACTTCTATTTCCCTTCAAAACTCTAACAGTCTCTCTAACACTACACCACACAACCCACTTTCAGGAGCACTCAAAGGGTCTCTTGTAAGCCTTGATGGAGCTTGTATTGAGAAGCTCTTATTCCATTGTGCAAGTGCTTTAGAGAGCAACGATATCACATTGGCTCAACAACTTATGTGGGTCCTCAACAACGTTGCTTCACCCCTTGGTGACACTAACCAAAGGCTCACCTCATGGTTCCTAAGGGCACTAATTTCTAGGGCTTTAAGGATTTGCCCCACAGTAGTGAATTTCAAGGGAAGCAACAACACCTTTCAAAGGAGGTGTATGAGTGTGGTCGAGCTAGCTGGGTATGTTGACTTAATCCCTTGGCATAGGTTTGGTTTTTGTGCATCAAATAATGAAATTTTGAAAGCAATTGAAGGGTTCCATAGGGTACATGTCCTTGATTTTAGCATCACTCATTGTATGCAATGGCCTACTTTTATAGATGCTTTAGCTAAGAGACCTGAAGGACCTCCTTCACTAAGAATCACTGTCCCATCTTGTAGGCCACATGTTCCTCCCTTGGTCAATATTTCAACACAAGAAGTTGGTCAACGTTTAGGGAACTTTGCTAAGTTTAGGGATGTACCTTTTGAATTTAATGTTTTAGGAAACACACCTCCAATATTAACATCTTCCGAATTAGGCAATGAATCAAGTAGTTTTCATTTTGAGTCAATGTTGAGTCTTTTGAATCCTAGTGTGCTAAACCTTAGGGAAGATGAAGCATTGGTCATAAATTGTCAAAATTGGCTAAGATACTTGTCTGATGATATAAAGGGTAGCCCTCAAAACCTTTCTCTAAGGGATACTTTTCTGAATATAGTTAAGAGTCTTAACCCAAGGATTATGCTCTTGGTGGATGAGGATTGTGACCTTAGTGCACCAACTCTAACATCAAGAATCACCACATGTTTCAATCATCTATGGATACCCTTTGATGCATTGGAGACTTTTCTTCCTAAGAGTAGTAGCCAGAGGACAGAATTTGAATCAGACATAGGCCAGAAAATTGAGAATATCATAGGATTTGAAGGGCATCAAAGGATAGAGAGATTGGAGTCTGGGATGCAAATGTCACAAAGAATGAGAAATGCTGGTTACATGAGTTTACCATTTTGTGATGAAACTGTGAGGGAAGTTAAGGCTTTGCTTGATGAGCATGCTAGTGGATGGGGTATGAAAAAGGAAGAAGGTATTTTAGTTCTCACATGGAAAGGAAACAGTTGTGTGTTTGTAACGGGTTGGGTCCCTAGTGATATGAGGGATCATATTGATGTTGACGGGAATTAG 1377 0.4016 MHVTHSMKSELKGTSISLQNSNSLSNTTPHNPLSGALKGSLVSLDGACIEKLLFHCASALESNDITLAQQLMWVLNNVASPLGDTNQRLTSWFLRALISRALRICPTVVNFKGSNNTFQRRCMSVVELAGYVDLIPWHRFGFCASNNEILKAIEGFHRVHVLDFSITHCMQWPTFIDALAKRPEGPPSLRITVPSCRPHVPPLVNISTQEVGQRLGNFAKFRDVPFEFNVLGNTPPILTSSELGNESSSFHFESMLSLLNPSVLNLREDEALVINCQNWLRYLSDDIKGSPQNLSLRDTFLNIVKSLNPRIMLLVDEDCDLSAPTLTSRITTCFNHLWIPFDALETFLPKSSSQRTEFESDIGQKIENIIGFEGHQRIERLESGMQMSQRMRNAGYMSLPFCDETVREVKALLDEHASGWGMKKEEGILVLTWKGNSCVFVTGWVPSDMRDHIDVDGN 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0089 458 PANTHER OS05G0500600 PROTEIN 8 446 - -
Lal25g0089 458 ProSiteProfiles GRAS family profile. 40 445 IPR005202 -
Lal25g0089 458 Pfam GRAS domain family 50 444 IPR005202 -
Lal25g0089 458 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 8 446 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0089 Lal-Chr25 597954 599330 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0089 45 446 GRAS Transcription Factor Family AT3G49950 46.829 3.82e-122 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lal25g0089 GRAS 1e-88 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0089 - - gmx:100805056 757.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0089 25 597954 599330 Lal25g0089 25 597954 599330 ECH