Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0088 ATGGAATTTACAAGACCTGCTGCTTATGTGGTTTTGTATGTCATTCTTCTTTGTGCTTTGGCCAAATGGGTTTCAGAGGGCAAGAGGTGGATACCCCATGAATTTTTTAAGGCAGAGCAGGTGTGGGAACATTGCAGGAAAGAATTGATAGAGAAGAACAATAATGATATAAAAGATTTTGATTTGCATATAATGGAAAACAATATAGATAAAGCAACTAGATTTCTTCCTCCATATATGAAACAAATTTTTTTGGATTGTATAAGAAAGAAAGTTCCTGCTTCTTCTATTTTTGAAGAAGAAGAAGTTTCACTCTTTGGTGTATCAGATGATCATGGAAGATATTTGATTTCTGAGTCACCACCAGATTCTCCATCATCAACTTCAAAGCCCTCATTTGAAGATTTACCAATCCCTCCAGATATGCTTGTGCTAATTCCACCACCACCACCTTCACCTCCTCCTCCTCCAACAACTCTTCATTCTAAGCATTATAACATACAAGAAAAAGCAATTATTGTTGGTGCTTTTGCATCAGTAATTATAATCTTTATAGGCTTGATCCTATGTTGCTGTGTGATTAGGAAGAGCAAAAAGGTTGACCAAGATGTGAAGCCTTTACTCACACTAAGCTCAAGTGATTTGTCCAGTGGTTCACAAAAATCTGGTAGTTTGGAAGATTCTCTTAAGAAAGAATATAGTATTAACTATGGAAAGAACCTTTCTGTTGTTAGGAAATCTTCCATTAAGCTTGAAGATAACAACACCTCACTACCTGAGACAACATTATCAGAAATCAAGGGACAATTACCAATCTCTACACTAAAACCTCCCCTGGCTAAATCAGTCACTGAGCTGCCACAGCCAGCCCTGCCACCACCACCTCCTCTCGCACCTCGGCCACCTCCGCCTCCTAAAGTAGCTAGGCCTCCACCTGCTCCACCAAAAAAACCAGTGGCTGGTAATGGAAATCAACTTTCGCCTTTAGGACCGCTTCGTGCTAGTGAGGATGGTGAAGACTCTGATGCACCAAAACCAAAGTTAAAGCCATTTTTCTGGGATAAGGTTGCTACAAATCCTGATCATGCAATGGTGTGGAATGATATTAGAGAAGGATCATTTCAGTTCAGTGAAGAAAAGATAGAGTCTTTATTTGGATTTTCCACTCAGAACAAAAATGAAAGAAGAAAAGACTCACCATCTCTAGAACCTTCTGTCCAGTACATTCGGATTATTGACCCTAGGAAAGCACAGAATTTATCAATTCTTCTTCGTGCTCTGAATGTGACAACAGAAGAAGTTGTTGATGCCATTAAAGAAGGTAACGAGATTTCGGTTGAGCTCATTCAGACATTGCTGAAGATGGTGCCGACAACAGAAGAGGAACTGAAGCTTAGGTTATTCACAGGAGAACTTTCTCAACTTGGCCCTGCAGATAGGTTTCTCAAGGTCTTGGTTGAAATTCCATTCGCTTTCAAACGTCTCGAGTCTCTAGTGTTCATGTTAACACTACCAGAAGAGTTCTCCAGCATTAAGGAATTCTTTTCAACATTAGAGGTTTCTTGCAACAAACTAAGAAAAAGCAGGCTCTTCCTAAAACTATTAGAAGCAGTTCTGAAGACTGGAAACCGCATGAATGATGGCACCTATCGCGGTGGTGCTCAAGCATTTAGGCTAGACACACTTTTGAAACTGGCTGATGTAAAAGGAACCGATGGCAAGACAACACTACTACACTTTGTGGTTCAGGAGACTATACGTTCCGAGGGCATAAGAGCTGTAAGAACAGCTAAAGGAGGTAGTAGTAGTAGCCATTCTAGTATGAAAACAGAGGATTTTGCTGAGGGTGTAAATGAAGATTCTGAAGAGCACTATCGCAGCCTCGGCCTTCAAGTAGTTTCAAGCCTAAGTAGTGAACTTGAAGATGTGAAAAAGGCGGCAGTTATAGACGGTGATGCACTAACAGCTGCAGTGTCAAAACTTGATCAGTCATTGAAGAAATCTGAAGAGTTGCTGAATAATGATTTGAAGAATGGCGAAGAGGAGTGTCAATTCCAACATTCTTTGTCGAGTTTTGTGGAAAAGGCGAAAAAAGAAGTGTCATGGCTGATAGAGGAAGAGAAGAGGATAATGGCTGAGGTTAAGAGCACAGCAGATTATTTCCATGGGAAAGCAGGAAAAGATGAAGGGCTGCGTTTGTTCGTGATTGTGCGCGATTTCTTGATAATGTTAGACAAGGTATGCAAAGAGGTGAAAGATAAAACAATTTTGAAGTCAGAAAAGGCTAAGAAAGAGTCTCAATCATCTTCTAACACTCATCATAATAGCTCACTTTCTGATGTACATAGGAGACTATTCCCAGCAATAGCAGAAAGGCGAGTGCATAACTCAAGTTCTAGTTCTAGTTCTAGTTCTGATGATGAGACTTAA 2430 0.4021 MEFTRPAAYVVLYVILLCALAKWVSEGKRWIPHEFFKAEQVWEHCRKELIEKNNNDIKDFDLHIMENNIDKATRFLPPYMKQIFLDCIRKKVPASSIFEEEEVSLFGVSDDHGRYLISESPPDSPSSTSKPSFEDLPIPPDMLVLIPPPPPSPPPPPTTLHSKHYNIQEKAIIVGAFASVIIIFIGLILCCCVIRKSKKVDQDVKPLLTLSSSDLSSGSQKSGSLEDSLKKEYSINYGKNLSVVRKSSIKLEDNNTSLPETTLSEIKGQLPISTLKPPLAKSVTELPQPALPPPPPLAPRPPPPPKVARPPPAPPKKPVAGNGNQLSPLGPLRASEDGEDSDAPKPKLKPFFWDKVATNPDHAMVWNDIREGSFQFSEEKIESLFGFSTQNKNERRKDSPSLEPSVQYIRIIDPRKAQNLSILLRALNVTTEEVVDAIKEGNEISVELIQTLLKMVPTTEEELKLRLFTGELSQLGPADRFLKVLVEIPFAFKRLESLVFMLTLPEEFSSIKEFFSTLEVSCNKLRKSRLFLKLLEAVLKTGNRMNDGTYRGGAQAFRLDTLLKLADVKGTDGKTTLLHFVVQETIRSEGIRAVRTAKGGSSSSHSSMKTEDFAEGVNEDSEEHYRSLGLQVVSSLSSELEDVKKAAVIDGDALTAAVSKLDQSLKKSEELLNNDLKNGEEECQFQHSLSSFVEKAKKEVSWLIEEEKRIMAEVKSTADYFHGKAGKDEGLRLFVIVRDFLIMLDKVCKEVKDKTILKSEKAKKESQSSSNTHHNSSLSDVHRRLFPAIAERRVHNSSSSSSSSSDDET 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0088 809 MobiDBLite consensus disorder prediction 287 318 - -
Lal25g0088 809 Pfam Formin Homology 2 Domain 340 744 IPR015425 -
Lal25g0088 809 PANTHER FORMIN-RELATED 1 801 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Lal25g0088 809 SUPERFAMILY Formin homology 2 domain (FH2 domain) 292 760 - -
Lal25g0088 809 Gene3D Formin, FH2 domain 344 779 IPR042201 -
Lal25g0088 809 MobiDBLite consensus disorder prediction 758 781 - -
Lal25g0088 809 MobiDBLite consensus disorder prediction 284 347 - -
Lal25g0088 809 ProSiteProfiles Formin homology-2 (FH2) domain profile. 338 770 IPR015425 -
Lal25g0088 809 PANTHER FORMIN-LIKE PROTEIN 1 801 - -
Lal25g0088 809 SMART it6_source 338 759 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0088 Lal-Chr25 591714 595392 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0088 293 752 FH2 protein (formin) Gene Family AT3G05470 46.983 1.13e-117 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0088 - - lja:Lj3g3v2888350.1 732.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0088 25 591714 595392 Lal25g0088 25 591714 595392 ECH