Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0074 ATGTCTTCCAATAAGAGAAGTGTTATGAAAACCCTACTCACTCCAAATGGAAGTTGTGGCTGCGGAAAGCCAAAGCCCTCTCAAGTACATGAGCCCATCGCAAAACCTAAAATTTCCATTTACCAAAACACAAAACCTAGCAGACGTACTTCCTCCACCACCACCACTTCCGGCGGCGGTGACCATGATGAAGATTTCACTTCCACCACCATCTCTGAAACCGACACTACTCATCTTGATCACAAGATTCATGACAAACCCATCAAGGATCATCAAAGTATATCGAAGCCATGCCCTAAACTAGTTGGGAGCATTGCAGTTGAGAAGGAGTCGGATGACCCGTACAGTGATTTTAGGTATTCGATGCTTCAAATGATAGTTGAGAAAGAGATATATTCAGAAAACGATCTTCAAGAACTTCTCCAGTGCTTTCTTCAACTGAATGCGCCGTGCCACCACCATGCCATCGTTCAAGTCTTCATTGAGATTTGTGAAGAGTCATTCTCTAAGAAGCTTGATGGTGGTGGTGGTGAAACATCTTGCAAGAATCACATCATTAATGGAAATAGATAG 573 0.4311 MSSNKRSVMKTLLTPNGSCGCGKPKPSQVHEPIAKPKISIYQNTKPSRRTSSTTTTSGGGDHDEDFTSTTISETDTTHLDHKIHDKPIKDHQSISKPCPKLVGSIAVEKESDDPYSDFRYSMLQMIVEKEIYSENDLQELLQCFLQLNAPCHHHAIVQVFIEICEESFSKKLDGGGGETSCKNHIINGNR 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0074 190 MobiDBLite consensus disorder prediction 75 93 - -
Lal25g0074 190 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 1 177 IPR038933 GO:0045892
Lal25g0074 190 MobiDBLite consensus disorder prediction 1 95 - -
Lal25g0074 190 Pfam Transcriptional repressor, ovate 111 166 IPR006458 -
Lal25g0074 190 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 105 164 IPR006458 -
Lal25g0074 190 MobiDBLite consensus disorder prediction 40 74 - -
Lal25g0074 190 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 1 177 - -
Lal25g0074 190 ProSiteProfiles OVATE domain profile. 107 166 IPR006458 -
Lal25g0074 190 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0074 Lal-Chr25 503879 505551 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lal25g0074 Ovate 2e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0074 - - lang:109350845 327.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0074 25 503879 505551 Lal25g0074 25 503879 505551 ECH
Lal25g0074 25 503879 505551 Lal2g0374 2 2207875 2208885 PCT
Lal2g0374 2 2207875 2208885 Lal25g0074 25 503879 505551 PCT